Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g0676 ATGGGAAGCGTTGAAGGACAAAGAACAACAACAGGATTTGCAGCAAGAGATCCATCTGGGTTTCTCTCTCCTTACACTTACGAACTCAGAGAAACAGGGGCAGAGGATGTTTACATAAGAGTTATATGTTGTGGGCTTTGTCATACTGATATTCATCAGATCAAAAACGAGCTTGGAATGTCCAATTATCCCATGGTTCCAGGGCATGAAGTTGTTGGTGAAGTGGTGGAAATTGGGAAGAATGTGAAGAGATTTAAAGTGAAGGATATTGTGGGAGTTGGATGCATAGTTGGATCTTGCAAAATTTGCGAGCGATGTGGAACTGACAGAGAACAATATTGCAATTACAAAATTTGGACTAATAACGATGTCTATACCGACGGTAGGCCCACTCAAGGCGGCTTCGCCGCCGCCATGGTCGTCGATCAAAAGTTTGTGGTGAAGGTACCAGATGGAATGGCACCGGAGCAGGCGGCGGCGCTACTATGCGCGGGCGTGACAGTGTACAGTCCATTGAACCATTTTGGGATGAAGAAAAGTGGGCTAAGAGGAGGGATCTTAGGGCTTGGTGGTGTTGGGCACATGGGGGTGAAACTAGCAAAGGCATTGGGCCATCATGTCACAGTTATAAGCTCCTCCAACAAGAAGAGGGAGGAAGCTCTGGACCATCTCGCGGCCGACGACTACCTCGTTAGCTCCGACGAGGATCGGATGCAACAGGCCGTCGACTCCCTCGACTACATCATCGACACCGTGCCGGTCTTTCACCCTCTCGAGCCTTATCTTTCGCTGCTCAAGCTCGATGGCAAGTTAATCATGTTGGGTGTTATTAATAATCCTCTCCAATTCGTCTCTCCCATGGTTATTCTTGGGAGGAAGACAATCACAGGGAGTTTCATAGGGAGCATGAAGGAGACACAGGAGATTCTGGATTTTTTCAAAGAGAAGGAATTGAGTTCAATGGTGGAAGTGGTGAAGATGGATTACATAAACAAAGCCATTGAAAGGTTGGAGAAGAATGATGTTAGATACAGGTTTGTTGTGGATGTTGAAGGAAGCAAATTTTAA 1068 46.54 MGSVEGQRTTTGFAARDPSGFLSPYTYELRETGAEDVYIRVICCGLCHTDIHQIKNELGMSNYPMVPGHEVVGEVVEIGKNVKRFKVKDIVGVGCIVGSCKICERCGTDREQYCNYKIWTNNDVYTDGRPTQGGFAAAMVVDQKFVVKVPDGMAPEQAAALLCAGVTVYSPLNHFGMKKSGLRGGILGLGGVGHMGVKLAKALGHHVTVISSSNKKREEALDHLAADDYLVSSDEDRMQQAVDSLDYIIDTVPVFHPLEPYLSLLKLDGKLIMLGVINNPLQFVSPMVILGRKTITGSFIGSMKETQEILDFFKEKELSSMVEVVKMDYINKAIERLEKNDVRYRFVVDVEGSKF 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6824667 6827284 - ClG42_02g0067600.10 Clacu02g0676 242744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g0676 355 PANTHER ALDEHYDE REDUCTASE 9 351 IPR047109 GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER)
Clacu02g0676 355 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491(InterPro)
Clacu02g0676 355 FunFam Putative cinnamyl alcohol dehydrogenase 6 321 350 - -
Clacu02g0676 355 Gene3D - 164 320 - -
Clacu02g0676 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Clacu02g0676 355 Pfam Alcohol dehydrogenase GroES-like domain 34 151 IPR013154 -
Clacu02g0676 355 CDD CAD1 11 349 IPR047109 GO:0016616(InterPro)
Clacu02g0676 355 Gene3D - 13 350 - -
Clacu02g0676 355 FunFam Cinnamyl alcohol dehydrogenase 164 320 - -
Clacu02g0676 355 Pfam Zinc-binding dehydrogenase 191 314 IPR013149 -
Clacu02g0676 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Clacu02g0676 355 SUPERFAMILY GroES-like 16 181 IPR011032 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0676 Clacu-Chr2:6824667 Clacu05g1707 Clacu-Chr5:25869105 4.30E-95 dispersed
Clacu02g0676 Clacu-Chr2:6824667 Clacu05g1190 Clacu-Chr5:10977744 2.60E-172 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g0676 K00083 - csv:101214622 631.713