Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu02g0700 | ATGGACCCGCCGGAGTACCACAAGCCATCCGTCCGAACGTCGAAGAAGCGCGACTCGGAGGAGCACTCTTTGCAACAGGCCACTGCCAACAAGAGACCCGTACTTGGCGAGATCACTAACTCATTGATCTTCAGTTCGAGCCAGTGCTCCTTTTCTGATCAGGAGATGACGGATAAGGATCTGGACAAAGAGGAATTACCTGAAGGAAGGTCGGCTGACCGTTCGGAGAAATCTGGCTCTGCATTTAGCATTTATAACCATCTTCGATCTCTGGAGATGGAATTACACGTGAAGTTACTGTCCAACAACATTGAAAAGGCTTACAATAGTGATTCCAGTTTAACTTTCACTCGTATGCGAGAAATTCTAGTGGATTGGTTAGTAGAGGTTGCTGAGGAATACAAGCTTGTGTCGGACACCCTATATCTCACCATATCACATATTGACAGATACCTATCCTGGCATGCTGTTGACAGAAGCAAGCTACAACTTCTTGGCGTTTGTTGCATGCTAATTGCATCGACGCATGAAGAGATCAGTCCTCCACATGTTGAAGACTTCTGCTATATAACAGATAATACTTATACCAAAGAACAGGTACTGAATATGGAGAGAGAAGTACGCAAATTCTTGACCTGTGAAGGCGCCCCCACGATAAAAGTTTTCCTCAGAATATATACAAAAGTTGCTTTAGAAAATTGGAAGGCTCAAGATTTGCAATTTGAGTTATTGAGTTGTTATCTCGCGGAGCTAAGTTTGTTAGATCACCGTTGTGTACATATCTTACCTTCAAAAGTCGCTGCATCAGCCATTTTTCTTTCTAGATTCACAATCCAACCAGAGAAACATCCTTGGTGTTTAGCACTACAACGTTACTCCAGTTACAGGCCATCTGAACTAAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAATAGAAAAGGAAGCTCTTTACTGGCAATCAGAGACAAGTACAAGCAGCATAAGTTCAAGTGTGTGGCGGAGTTATCTTCACCCTCAGAAATTCCTGCATATTATTTTGAGGACATTGATCAGCAATCATTCAACGGGTTCTTAAGAACTTAA | 1089 | 42.52 | MDPPEYHKPSVRTSKKRDSEEHSLQQATANKRPVLGEITNSLIFSSSQCSFSDQEMTDKDLDKEELPEGRSADRSEKSGSAFSIYNHLRSLEMELHVKLLSNNIEKAYNSDSSLTFTRMREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAVDRSKLQLLGVCCMLIASTHEEISPPHVEDFCYITDNTYTKEQVLNMEREVRKFLTCEGAPTIKVFLRIYTKVALENWKAQDLQFELLSCYLAELSLLDHRCVHILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSSYRPSELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQQSFNGFLRT | 362 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 7212989 | 7216175 | - | ClG42_02g0070000.10 | Clacu02g0700 | 242768 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu02g0700 | 362 | SMART | cyclin_7 | 125 | 209 | IPR013763 | - | |
Clacu02g0700 | 362 | SMART | cyclin_7 | 221 | 309 | IPR013763 | - | |
Clacu02g0700 | 362 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Clacu02g0700 | 362 | MobiDBLite | consensus disorder prediction | 48 | 77 | - | - | |
Clacu02g0700 | 362 | Gene3D | - | 97 | 215 | - | - | |
Clacu02g0700 | 362 | SUPERFAMILY | Cyclin-like | 84 | 212 | IPR036915 | - | |
Clacu02g0700 | 362 | PIRSF | Cyclin_A_B_D_E | 2 | 347 | IPR046965 | GO:0016538(InterPro)|GO:0044772(InterPro) | |
Clacu02g0700 | 362 | Pfam | Cyclin, N-terminal domain | 107 | 211 | IPR006671 | - | |
Clacu02g0700 | 362 | SMART | Cyclin_C_2 | 217 | 340 | IPR004367 | - | |
Clacu02g0700 | 362 | PANTHER | CYCLINS | 59 | 328 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Clacu02g0700 | 362 | ProSiteProfiles | Linker histone H1/H5 globular (H15) domain profile. | 288 | 362 | IPR005818 | GO:0000786(InterPro)|GO:0003677(InterPro)|GO:0006334(InterPro) | |
Clacu02g0700 | 362 | FunFam | Cyclin A1 | 202 | 336 | - | - | |
Clacu02g0700 | 362 | MobiDBLite | consensus disorder prediction | 55 | 75 | - | - | |
Clacu02g0700 | 362 | SUPERFAMILY | Cyclin-like | 217 | 341 | IPR036915 | - | |
Clacu02g0700 | 362 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Clacu02g0700 | 362 | Gene3D | - | 84 | 336 | - | - | |
Clacu02g0700 | 362 | Pfam | Cyclin, C-terminal domain | 217 | 339 | IPR004367 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu02g0700 | Clacu-Chr2:7212989 | Clacu09g0236 | Clacu-Chr9:2184445 | 1.00E-67 | dispersed | |
Clacu02g0700 | Clacu-Chr2:7212989 | Clacu05g2234 | Clacu-Chr5:30812053 | 7.00E-85 | wgd | |
Clacu02g0700 | Clacu-Chr2:7212989 | Clacu08g1785 | Clacu-Chr8:27240746 | 2.60E-79 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu02g0700 | K06627 | - | csv:101213896 | 623.624 |