Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g0710 ATGATGTTGAGGTCGTGTTGCCGGCCGCTCGAGCGGTTCATTGGCCGGTGGAGCGGCGATGGACTACTCTGGCAGTCGGAATTGAAGCCTCATGCCTCTGGTGATTACTCAATCGCTGTTGTTCAGGCTAATTCTTGTCTTGAGGATCAGAGTCAGGTCTTCACGTCTCCTTCTGCTACTTATGTTGGTGTTTATGATGGCCATGGCGGTCCGGAGGCTTCTCGCTTCGTGAATAAGCATCTTTTTCCTTATATGCATAAGTTTGCTTCAGAACAAGGTGGACTATCGGAGGATGTTATTAAGAAGGCATTCAATGCTACAGAAGAGGAGTTTACGCGTTTGGTTAAGCGGGCTTTGCCTGCAAAGCCACAGATTGCTTCAGTTGGATCATGCTGTCTTGTAGGTGCAATTTCAAATACAAAGTTATACATTGCGAATCTCGGTGATTCGAGAGCTGTGCTTGGTCGTAGAGGTTCAGAGAGTAAGATAACACCAGTAGTTGCAGAACGGTTGTCCACCGATCACAATGTTGGAGTAGATGAAGTTAGGAAAGAGGTTGTAGCACTTCATCCTGATGATTCCCATATAGTTGTCTATACTCGTGGAGTTTGGAGGATAAAAGGCATAATTCAGGTTTCAAGATCTATTGGCGATGTATATTTAAAGAAACCCGAGTTCAACCGGGATCCAATATTCCAACAATTTGGGAACCCCGTTCCTTTGAAACGACCAGTAATGACTGCAGAACCATCGATCCTGACACGAGAGCTCAAACCCCAAGATTTATTCCTCATCTTTGCATCAGATGGTCTCTGGGAACAACTGACTGATGAAGCTGCGGTGGAGATAGTTTTCAAGAACCCAAGAGCTGGAATTGCAAAGAGATTAGTGCGTGCTGCCCTCCACGAGGCAGCAAAGAAGCGTGAAATGAGATACTCCGACTTAAAGAAGATCGAAAAGGGGATTCGCCGTCATTTCCACGACGACATCACTGTCATCGTCGTTTATCTCGACCACAATAGAAGCTCACACTCCAATCGAGCAAAGAACACGGTTGCCGGGTACACTAGTGCACCTGTTGACATTTTCTCTCTTAAATCAAACAATGAAGAAGAGGAAAAACTTCACACAATGTTGTGA 1140 45.53 MMLRSCCRPLERFIGRWSGDGLLWQSELKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYMHKFASEQGGLSEDVIKKAFNATEEEFTRLVKRALPAKPQIASVGSCCLVGAISNTKLYIANLGDSRAVLGRRGSESKITPVVAERLSTDHNVGVDEVRKEVVALHPDDSHIVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPIFQQFGNPVPLKRPVMTAEPSILTRELKPQDLFLIFASDGLWEQLTDEAAVEIVFKNPRAGIAKRLVRAALHEAAKKREMRYSDLKKIEKGIRRHFHDDITVIVVYLDHNRSSHSNRAKNTVAGYTSAPVDIFSLKSNNEEEEKLHTML 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7326003 7328101 - ClG42_02g0071000.10 Clacu02g0710 242778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g0710 379 PANTHER PROTEIN PHOSPHATASE 29 336 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Clacu02g0710 379 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
Clacu02g0710 379 SUPERFAMILY PP2C-like 43 338 IPR036457 -
Clacu02g0710 379 Gene3D - 25 349 IPR036457 -
Clacu02g0710 379 CDD PP2Cc 42 337 IPR001932 -
Clacu02g0710 379 FunFam Probable protein phosphatase 2C 42 26 345 - -
Clacu02g0710 379 SMART PP2C_4 25 335 IPR001932 -
Clacu02g0710 379 Pfam Protein phosphatase 2C 56 306 IPR001932 -
Clacu02g0710 379 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0710 Clacu-Chr2:7326003 Clacu10g1738 Clacu-Chr10:30914234 1.10E-117 dispersed
Clacu02g0710 Clacu-Chr2:7326003 Clacu02g1241 Clacu-Chr2:24995670 1.50E-109 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g0710 - - - 0.0