Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu02g0844 | ATGGATTCTCTCTCGGCTCTCCTTCTACTCTTTCTTGTTTTCCTTTTTCTGCGGCAACTCAGAACCCGCCGGAGAAATCTGCCGCCGAGCCCACCGTCAGTTCCGATTATTGGCCATCTTCACCTCCTTGAACGCCCAACCCACCGGAACTTCCAAAACATCGCCGCCAAATACGGACCCATTTTCACTCTCCGATTCGGATCTCGCCTTGCCCTTATAGTCTCTTCACTCCAAATAGCCCAAGAATGCTTCACCAAAAACGACCTCATTTTCGCCAACCGCCCGCGTATGCTCTCCGGAAAATACCTCGGCTACGACTGCACCACCATGGCCACCGCCTCTTACGGCGACCACTGGCGAAACCTCCGCCACCTCGCCGCCATGGAGATCTTCTCCTCGACGCGCCTCAACGCCTCTCTCGGCATCCGGAAGGATGAAATCCGGCGATTGTTGGTTAAACTCCATTCGGAATCGTTCTCTAAGGTGGAGTTGAAATCGATGTTTTCGGAACTGAGTTTCAACATCGTGATGAGGATCGTGGCCGGAAAACGGTACTACGGCGAAGAGGTTTCCGATGAGGCGGAGGCGAGGGAGTTCAGAGAACTTATGGAAGAGGTTTCACGTCATGGAGGAACTACGCAATGGGTGGATTTCATGCCGATTTTGAAATGGATTGGGTTTGATGGATATGAGAAGAGTTTGGCCAAATCGGCGATAAGGGCCGATCGATTCGTGCAGGAATTGGTTGAAGAACGACGGAATAAGAAAGTATTGGGAAGAGAAGAACAGAGTTGTCTGCTTCATCGGCTTCTGGAATTGCAGCTCTCTGAACCCGAATATTACAGTGATGAGATCATCAAAGGGATCGTTCTGGTTTTGTTGCGTGCAGGAACAGACACGTCATCTGTGAGCTTGGACTGGATAATGACTCAACTACTGAACCATCCAGAGGTATTAGCCAAAGCCAAAGCTGAAATAGACACCAAGATTGGCCAAGATCGATCCCTTCAGGAAACAGATATCGCCAACCTTAGCTATCTTCAAGCCATTATTTCTGAAACCTTTCGGTTGCACCCTCCAGCCCCAATGCTCCTCACACACTATTCTTCCCACGACTGCACCGTCGCAGGCTACAACATTCCACGTGGCACAATGTTGTTGGTCAATGCTTGGGCAATTCACAGAGACCCCAAGTTGTGGGACGACCCGACGACCTTCCGACCGGAGAGATTCTTGGGGGCAGGGAATGAGTTGCAAGCCAATAAACTCATTCCTTTCGGAGTTGGAAGGAGGGCTTGTCCTGGGGAAACTATGGGTTTACGTGTTATAGGACTGACTTTGGGTCTACTGATTCAGTGCTATGAGTGGAAAAAGGTTGGATATGAAAATGTAGACATGACTGAAGGTGGAGGTATCACCATTCTCAAACTGAAGCCTTTGGAAACCATGTGTAAAGCTCGACCAATTATGGATAAAGTTTTATGTAATGGTTTGGACTAA | 1500 | 49.2 | MDSLSALLLLFLVFLFLRQLRTRRRNLPPSPPSVPIIGHLHLLERPTHRNFQNIAAKYGPIFTLRFGSRLALIVSSLQIAQECFTKNDLIFANRPRMLSGKYLGYDCTTMATASYGDHWRNLRHLAAMEIFSSTRLNASLGIRKDEIRRLLVKLHSESFSKVELKSMFSELSFNIVMRIVAGKRYYGEEVSDEAEAREFRELMEEVSRHGGTTQWVDFMPILKWIGFDGYEKSLAKSAIRADRFVQELVEERRNKKVLGREEQSCLLHRLLELQLSEPEYYSDEIIKGIVLVLLRAGTDTSSVSLDWIMTQLLNHPEVLAKAKAEIDTKIGQDRSLQETDIANLSYLQAIISETFRLHPPAPMLLTHYSSHDCTVAGYNIPRGTMLLVNAWAIHRDPKLWDDPTTFRPERFLGAGNELQANKLIPFGVGRRACPGETMGLRVIGLTLGLLIQCYEWKKVGYENVDMTEGGGITILKLKPLETMCKARPIMDKVLCNGLD | 499 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 9988587 | 9992637 | - | ClG42_02g0084400.10 | Clacu02g0844 | 242912 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu02g0844 | 499 | PRINTS | E-class P450 group I signature | 171 | 189 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0844 | 499 | PRINTS | E-class P450 group I signature | 348 | 366 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0844 | 499 | PRINTS | E-class P450 group I signature | 305 | 331 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0844 | 499 | PRINTS | E-class P450 group I signature | 55 | 74 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0844 | 499 | PRINTS | E-class P450 group I signature | 79 | 100 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0844 | 499 | PRINTS | E-class P450 group I signature | 423 | 433 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0844 | 499 | PRINTS | E-class P450 group I signature | 285 | 302 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0844 | 499 | PRINTS | E-class P450 group I signature | 389 | 413 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0844 | 499 | PRINTS | E-class P450 group I signature | 433 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0844 | 499 | CDD | CYP81 | 59 | 480 | - | - | |
| Clacu02g0844 | 499 | PRINTS | P450 superfamily signature | 349 | 360 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0844 | 499 | PRINTS | P450 superfamily signature | 296 | 313 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0844 | 499 | PRINTS | P450 superfamily signature | 424 | 433 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0844 | 499 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 426 | 435 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu02g0844 | 499 | FunFam | Cytochrome P450 family protein | 19 | 490 | - | - | |
| Clacu02g0844 | 499 | PANTHER | CYTOCHROME P450 82C3-RELATED | 9 | 487 | IPR050651 | - | |
| Clacu02g0844 | 499 | Gene3D | Cytochrome P450 | 20 | 493 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0844 | 499 | SUPERFAMILY | Cytochrome P450 | 28 | 487 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0844 | 499 | Pfam | Cytochrome P450 | 28 | 470 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu02g0844 | Clacu-Chr2:9988587 | Clacu06g0156 | Clacu-Chr6:1765317 | 2.30E-147 | dispersed | |
| Clacu02g0844 | Clacu-Chr2:9988587 | Clacu02g0845 | Clacu-Chr2:10006912 | 2.20E-177 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu02g0844 | K13260 | - | csv:101210967 | 848.195 |