Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g0845 ATGGATTCTCTCAACGCTCTCTTTCTCCTTCTTGCTTTCCTTTTACTGCTACAACTCCATTCGGAATCGTTCGCTAAGGTGGAGTTGAAATCGATGTTTTCGGAACTGAGTTTCAACACCGTGATGAGGGTCGTGGCCGGAAAACGGTATTACGGCGAGGAGGTTTCCGATGAGGCGGAGGCGAGGGAGTTCAGAGAGCTTATGGAGGAGATTTCTCGCCATGGAGGAGCTTCTCAATGGATCGATTTCATGCCGATTTTGAAATGGATTGGATTTGACGGATATGAGAAGAGTTTGGCCAAATTGACGAAAAGGGCCGATCGATTTATGCAGGAATTGGTTGAAGAGCGGCGGAATAAGAAAGTGTTGGCAAAAGAAGAACAGAGTTCTCTGCTTCATCGGCTTCTTGAATTGCAGCTCTCTGAACCCGAATACTACACCGATCAGATCATCAAAGGGATCGTTCTGGTTCTATTGCGTGCAGGAACAGACACATCATCTGTGACCTTGGATTGGGCCATGACTCAACTACTCAACCATCCGGAGGTATTAGTTAAAGCCAAAGCTGAGATAGACACCAAGATTGGTCAAGATCGACCCCTTGAGGAAGCAGATCTCAACAACCTTAACTACCTTCAAGCTATAATTTCTGAGACCTTTCGATTGCACCCCGCAGCACCGATGCTCCTCTCGCACTATTCCTCTGACGACTGTACTGTCGCAGGCTACAACATTCCACGTGGGACGACGTTGTTGGTCAATGCTTGGGCAATTCATAGAGACCCGAAGCTGTGGGACGACCCGACGAGCTTCCGACCGGAGAGATTCTTGGGGGCAGGGAATGGGTTGCAGTCCAATAAACTCATTCCTTTTGGAATTGGAAGGAGGGCTTGTCCTGGGGAAACTATGGCTTTACGTTTTATAGGATTGACTTTGGGGCTATTGATTCAGTGTTATGAGTGGAAAAAGGCTGGAGGATGTGAAAAGGTTGACATGACTGAAGGTGGAGGTATCACCATTCATAAAGTTAAGCCTTTAGAAACTATGTGTAAAGCTCGTCCAATTATGGATAAAGTTCTATCAAATGGTTTGGACTAA 1098 46.54 MDSLNALFLLLAFLLLLQLHSESFAKVELKSMFSELSFNTVMRVVAGKRYYGEEVSDEAEAREFRELMEEISRHGGASQWIDFMPILKWIGFDGYEKSLAKLTKRADRFMQELVEERRNKKVLAKEEQSSLLHRLLELQLSEPEYYTDQIIKGIVLVLLRAGTDTSSVTLDWAMTQLLNHPEVLVKAKAEIDTKIGQDRPLEEADLNNLNYLQAIISETFRLHPAAPMLLSHYSSDDCTVAGYNIPRGTTLLVNAWAIHRDPKLWDDPTSFRPERFLGAGNGLQSNKLIPFGIGRRACPGETMALRFIGLTLGLLIQCYEWKKAGGCEKVDMTEGGGITIHKVKPLETMCKARPIMDKVLSNGLD 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10006912 10008929 - ClG42_02g0084500.10 Clacu02g0845 242913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g0845 365 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 291 300 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu02g0845 365 Gene3D Cytochrome P450 9 355 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0845 365 Coils Coil 92 126 - -
Clacu02g0845 365 PRINTS E-class P450 group I signature 298 321 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0845 365 PRINTS E-class P450 group I signature 254 278 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0845 365 PRINTS E-class P450 group I signature 150 167 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0845 365 PRINTS E-class P450 group I signature 36 54 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0845 365 PRINTS E-class P450 group I signature 213 231 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0845 365 PRINTS E-class P450 group I signature 170 196 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0845 365 PRINTS E-class P450 group I signature 288 298 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0845 365 Pfam Cytochrome P450 19 342 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0845 365 SUPERFAMILY Cytochrome P450 16 353 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0845 365 PANTHER CYTOCHROME P450 82C3-RELATED 23 353 IPR050651 -
Clacu02g0845 365 PRINTS P450 superfamily signature 161 178 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0845 365 PRINTS P450 superfamily signature 214 225 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0845 365 PRINTS P450 superfamily signature 289 298 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0845 365 PRINTS P450 superfamily signature 298 309 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0845 Clacu-Chr2:10006912 Clacu06g0154 Clacu-Chr6:1753524 4.00E-104 dispersed
Clacu02g0844 Clacu-Chr2:9988587 Clacu02g0845 Clacu-Chr2:10006912 2.20E-177 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g0845 K13260 - csv:101210967 574.704