Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu02g0848 | ATGCTTTATCTCTGTCTCTCTCTTATCACATTCATATCAGTTTTCACATTTCTAGTGCGACCCTCCATAAACCTTCCCCCAAGTCCACCCTTTTCTCTCCCAATTATAGGCCATCTCTATCTCCTAAAACGCCCCATCCATCAAACCCTTCAAAAGCTTTCCAAGAAATATGGCCACGTCTTCTCTCTCCACTTAGGCTCTCAACTCGTTGTCGTCGTTTCTTCTCCTTCCGCCGTCAAAGAATGCTTCACAGTGAATGATATCATTCTTGCAAATCGGCCGCTGTCCAACATTACCAAGCACTTGACTTACAACAACACAATCTTCTCGGCGTCCCCTTATGGCGACTATTGGCGAGACCTCCGCCGAATTAGCATCATAGAGATTTTCTCAGCCACTCGCCTTAATATGTTTTTGGAGATTAGGAAAGACGAAATCAAACGCCTACTTGGTAAGTTGTGTGGCATTTCAAGTGATGGTTTTGCGAGAGTTGAGATGGGATCTATATTTTCTGAGTTGTCGTCTAATATTGTGATGAGAATGGTTATGGGGAAGAGGTTTTATGGAGAGGATGTGATGGATGTAGAACAAGCAAGGGAATTTAGAGATATTGTGAAACAAGTCATGGAAAATTGTGGGACTTACAATTCAAGAAGTTTTATACCCTTGTTGAATTGGATTGACATAACTCGTTATGAGAAGAGGGTAATAAAACTAGGACAACGAAACGATCAATTTTTGCAAGGGTTGATTGATGAGCATAGGAATCAAAAGGAGGAAGGTAGAAATACTATGATTGATCATTTACTTTCCTTGCAAGAATCCCAGCTTGATTTTATGAGTGATCAAGTTATCAAAGGTCTTATAACGGTAATATTACTTGCAGGCACCGACACAATAGCTGTGACTATGGAATGGGCATTGTCCCATTTGCTCAACAATCCTGATGTGCTAAACAATGCTAGGATTGAGTTGGACTCAATAATTGGACAAGAGCGATTGGTTGATGAATCTGATTTGTCGAAATTGAGTTATTTAGAAGGAGTAATCTATGAAACATTACGATTAAACCCAGCAGCTCCTTTACTAGTGCCACATTATGCATCTAAAAATTGTTCAATAGCGGGCTACGAAATCCCCTGCGATACGATCGTCTTGATTAATGCTTGGGCAATACATAGAGATCCAAACATATGGGAAGATGCAACTACATTTAACCCCGAAAGACATAAGAACCCCAAGGTAGATGAGTTATTGTACAAACTAATACCTTTCGGTGTCGGGCGAAGAGCTTGCCCTGGTGTGGGAATGGCTCATCGTGTAGTTGGCTTGGCCTTGACATCATTGATTCAATGCTTTGAATGGAAGAGGGTGAATAGTGAACTTGTGGACATGGCCGAGGGCGTTGGGCTCACAATGCCTAGAGCTCAACCATTGCAAGCCATGTGTAAATCCCGACCAATCATGAATAGGGTTCTCATTTAA | 1485 | 41.55 | MLYLCLSLITFISVFTFLVRPSINLPPSPPFSLPIIGHLYLLKRPIHQTLQKLSKKYGHVFSLHLGSQLVVVVSSPSAVKECFTVNDIILANRPLSNITKHLTYNNTIFSASPYGDYWRDLRRISIIEIFSATRLNMFLEIRKDEIKRLLGKLCGISSDGFARVEMGSIFSELSSNIVMRMVMGKRFYGEDVMDVEQAREFRDIVKQVMENCGTYNSRSFIPLLNWIDITRYEKRVIKLGQRNDQFLQGLIDEHRNQKEEGRNTMIDHLLSLQESQLDFMSDQVIKGLITVILLAGTDTIAVTMEWALSHLLNNPDVLNNARIELDSIIGQERLVDESDLSKLSYLEGVIYETLRLNPAAPLLVPHYASKNCSIAGYEIPCDTIVLINAWAIHRDPNIWEDATTFNPERHKNPKVDELLYKLIPFGVGRRACPGVGMAHRVVGLALTSLIQCFEWKRVNSELVDMAEGVGLTMPRAQPLQAMCKSRPIMNRVLI | 494 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 10046465 | 10048730 | - | ClG42_02g0084800.10 | Clacu02g0848 | 242916 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu02g0848 | 494 | SUPERFAMILY | Cytochrome P450 | 26 | 486 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0848 | 494 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 425 | 434 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu02g0848 | 494 | CDD | CYP81 | 58 | 479 | - | - | |
| Clacu02g0848 | 494 | PRINTS | E-class P450 group I signature | 284 | 301 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0848 | 494 | PRINTS | E-class P450 group I signature | 78 | 99 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0848 | 494 | PRINTS | E-class P450 group I signature | 304 | 330 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0848 | 494 | PRINTS | E-class P450 group I signature | 388 | 412 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0848 | 494 | PRINTS | E-class P450 group I signature | 347 | 365 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0848 | 494 | PRINTS | E-class P450 group I signature | 432 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0848 | 494 | PRINTS | E-class P450 group I signature | 54 | 73 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0848 | 494 | PRINTS | E-class P450 group I signature | 422 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0848 | 494 | PRINTS | E-class P450 group I signature | 173 | 191 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0848 | 494 | Pfam | Cytochrome P450 | 27 | 474 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0848 | 494 | PRINTS | P450 superfamily signature | 295 | 312 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0848 | 494 | PRINTS | P450 superfamily signature | 423 | 432 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0848 | 494 | PRINTS | P450 superfamily signature | 348 | 359 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0848 | 494 | PANTHER | CYTOCHROME P450 82C3-RELATED | 11 | 486 | IPR050651 | - | |
| Clacu02g0848 | 494 | FunFam | Cytochrome P450 family protein | 18 | 489 | - | - | |
| Clacu02g0848 | 494 | Gene3D | Cytochrome P450 | 19 | 489 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu01g1782 | Clacu-Chr1:30030663 | Clacu02g0848 | Clacu-Chr2:10046465 | 4.40E-170 | dispersed | |
| Clacu01g1786 | Clacu-Chr1:30043929 | Clacu02g0848 | Clacu-Chr2:10046465 | 8.60E-166 | dispersed | |
| Clacu02g0848 | Clacu-Chr2:10046465 | Clacu02g0850 | Clacu-Chr2:10140350 | 1.80E-176 | dispersed | |
| Clacu02g0848 | Clacu-Chr2:10046465 | Clacu02g0849 | Clacu-Chr2:10081395 | 3.00E-163 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu02g0848 | K13260 | - | csv:105434396 | 609.757 |