Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu02g0853 | ATGGATCTTCTTTTGCTCTCTATTTCTCTAATCTCTCTATTCTCTCTTCTCCTTGCCTTCAACTTCTTCCAGCAACCTCATCACAAAAACCTCCCACCAACTCCATCTTTTTCTCTTCCATTAATAGGCCATCTCCATCTCCTCAAACATCCTGTCCATCAAACACTTCAAAGCCTCTCCCAAAAGCATGGCCATGTCTTTTCTCTCCGATTCGGCTCACGTCTTGTTGTAGTTGTATCCTCTTCTTCTCTTGTCCAAGAATGCTTTACAAAGAACGATGTGATTCTTGCCAATCGCCCATTGTTCAAGAGTTCGAAATACTTAACCTACAACTATACCAACTTAGCCATCTCTCCTTATGGAGAACATTGGCGAAACCTCCGCCGAATCAGCACCCTTGAGATTTTCTCCGCAAGTCGCCTTAATCTTTTCAGGGGAATTAGGGAAGATGAAGTCAAACGGTTGTTGTGTAAATTGTGGGATAAATATTCGTTTGAAGAGTTTAAGGTAGTGGAGATGGTGCCAATATTTATGGATCTTATGTTCAATATTGTTATGAGAATGATGGCGGGAAAGAAGTATTGTGGTGATGATTTGGAAGATGAGGAACGATCTAAGAAATTTAAAGAGATGGTGACACAAGTTCTTGCAATTAGTGCAATGGGAAATCCAGGAGATGTTATACCTTTATGGAATTGGATTGATCCAACTTGTTACGAGAAAAGGGTAAAAAAGCTTGCAAAGACATCAGATGAACTTCTTCAACAACTAATTGATGAGATTAGGAATCAAAATGATGGAGAAAACACCATGATTCAACATTTACTTGGTTTGCAGAATACCCAACCTGAATGTTATAGTGACCAAATTATCAAAGGCCTCCTACAAGTAGCAATTTTAGCAGGAATAGACACAATTGCAGTGACCTTAGAATGGGCACTATCTCAATTGCTCAATAATTCAGAGGTGTTGAAGAAAGCTAGAGATGAGATAGATAGTTCCATTGGGCAAGATCGTTTTGTTAACGAAGCTGATTTGTCGAGTTTGAGTTACTTGGAAGGAATAATCTCTGAGACCCTACGATTGAACCCAGCCGCTCCCCTTCTGCTGCCACATTGTGCCTCTGAAGACTGCAAAATAGGAGGCTACGATGTACCACGTGACACGATGGTATTAATCAATGCTTGGGCCATACACAGAGACTCAAGTCTATGGGAAGATGCCACAAGTTTCAAGCCTGAAAGACATGAAAATGCAATTGGAGTTGATTTGTACAAACTATTACCATTTGGGTTGGGAAGGAGAGCTTGCCCTGGAATGGGAATGGCACAACGTGTAATTGCATTGACTCTGGCGTCGTTGATTCAATGCTTTGAGTGGCAAAGACTCAGCAACTCATTGGTGGACATGACAGAAGGCCAAGGACTCACTATGCCGAAAGCTCAACCATTGACAGCCAAGTGTAGACCTCGTTCAATCATGAAAAAACTATTGCCAATGAAACAATAA | 1509 | 41.09 | MDLLLLSISLISLFSLLLAFNFFQQPHHKNLPPTPSFSLPLIGHLHLLKHPVHQTLQSLSQKHGHVFSLRFGSRLVVVVSSSSLVQECFTKNDVILANRPLFKSSKYLTYNYTNLAISPYGEHWRNLRRISTLEIFSASRLNLFRGIREDEVKRLLCKLWDKYSFEEFKVVEMVPIFMDLMFNIVMRMMAGKKYCGDDLEDEERSKKFKEMVTQVLAISAMGNPGDVIPLWNWIDPTCYEKRVKKLAKTSDELLQQLIDEIRNQNDGENTMIQHLLGLQNTQPECYSDQIIKGLLQVAILAGIDTIAVTLEWALSQLLNNSEVLKKARDEIDSSIGQDRFVNEADLSSLSYLEGIISETLRLNPAAPLLLPHCASEDCKIGGYDVPRDTMVLINAWAIHRDSSLWEDATSFKPERHENAIGVDLYKLLPFGLGRRACPGMGMAQRVIALTLASLIQCFEWQRLSNSLVDMTEGQGLTMPKAQPLTAKCRPRSIMKKLLPMKQ | 502 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 10215057 | 10217206 | + | ClG42_02g0085300.10 | Clacu02g0853 | 242921 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu02g0853 | 502 | Gene3D | Cytochrome P450 | 24 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0853 | 502 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 430 | 439 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu02g0853 | 502 | PRINTS | P450 superfamily signature | 428 | 437 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0853 | 502 | PRINTS | P450 superfamily signature | 354 | 365 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0853 | 502 | PRINTS | P450 superfamily signature | 437 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0853 | 502 | PRINTS | P450 superfamily signature | 301 | 318 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0853 | 502 | CDD | CYP81 | 64 | 484 | - | - | |
| Clacu02g0853 | 502 | SUPERFAMILY | Cytochrome P450 | 32 | 491 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0853 | 502 | FunFam | Cytochrome P450 family protein | 22 | 494 | - | - | |
| Clacu02g0853 | 502 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0853 | 502 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0853 | 502 | PRINTS | E-class P450 group I signature | 394 | 418 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0853 | 502 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0853 | 502 | PRINTS | E-class P450 group I signature | 427 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0853 | 502 | PRINTS | E-class P450 group I signature | 437 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0853 | 502 | PRINTS | E-class P450 group I signature | 310 | 336 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0853 | 502 | PRINTS | E-class P450 group I signature | 290 | 307 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0853 | 502 | PRINTS | E-class P450 group I signature | 353 | 371 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0853 | 502 | PANTHER | CYTOCHROME P450 82C3-RELATED | 15 | 491 | IPR050651 | - | |
| Clacu02g0853 | 502 | Pfam | Cytochrome P450 | 32 | 480 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu02g0850 | Clacu-Chr2:10140350 | Clacu02g0853 | Clacu-Chr2:10215057 | 4.30E-197 | dispersed | |
| Clacu02g0853 | Clacu-Chr2:10215057 | Clacu06g0156 | Clacu-Chr6:1765317 | 1.50E-149 | dispersed | |
| Clacu02g0852 | Clacu-Chr2:10162441 | Clacu02g0853 | Clacu-Chr2:10215057 | 2.70E-184 | tandem | |
| Clacu02g0853 | Clacu-Chr2:10215057 | Clacu02g0854 | Clacu-Chr2:10236770 | 2.20E-193 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu02g0853 | K13260 | - | csv:101205391 | 829.32 |