Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g1224 ATGGAAACTCGGAGCAGAAAGCGGGCGGAGGCCTCCTCAGCAGCCCCTTCTTCTTCGTCTTCTGGTCCAACAACCCGTTCTACCAAGCGCGCACGTCTCTCTGGTACTTCTCCGTCGAATCTTGCTGCATCCACTCTTTCGATCACAACACGTTCTCGCTCTACCCGAACCCAAGAACCGTCTGCCACCAGTACTCCAATGGACTCGACTAATGAATCATCAGGGTCACGCCGACGCGGGAAGAATTCTGATAAAGAAAACTCGGATAAGGGGAAGGAGAAGGAACACGAGGTTAGAATCGGGGATAGAGAAAGGAATGCTGAGCAGAGCTTTGGGCTAAATATTGAAGGTAGTGGCGGTGGGGAGGATGATGATAACGACAGTGAAGGAGGAATGGGAGTCTTGCAGCAGAATTTATCCACAGCGAGTAGCGCCCTTCAAGGACTTCTCAGGAAACTCGGTGCTGGACTGGATGATTTACTTCCATCTTCTGCAATTGCATCGGCTTCATCCTCACAGCAGAGAGGACGGCTTAAGAAGATCTTATCTGGGTTGAGAGCGGATGGAGAAGAAGGGAGGCAGGTTGAGGCATTGACACAGCTATGTGAGATGCTCTCAATCGGAACTGAGGAGTCTCTAAGTACTTTCTCTGTTGATTCCTTCGTCCCTGTCCTTGTCGGGTTACTTAATCACGAAAGCAATCCTGATATAATGCTTCTAGCGGCTAGGGCACTAACCCATCTGTGCGATGTCCTCCCTTCATCATGTGCTGCTGTCGTGCATTATGGTGCTGTTTCCTGCTTCTGTGCGAGATTGCTGACTATAGAATACATGGACCTAGCTGAACAGTCCCTGCAAGCTTTAAAGAAGATATCCCAGGAACACCCTACTGCTTGCCTGCGGGCTGGTGCTCTTATGGCCGTGCTTTCATATTTAGATTTCTTCTCTACAGGAGTTCAGCGAGTCGCATTGTCCACTGCTGCTAATATGTGCAAGAAGCTTCCTTCGGATGCAGCTGACTTTGTGATGGAAGCTGTTCCCCTGCTGACAAACCTTCTTCAGTATCATGATGCAAAAGTGTTGGAGCATGCTTCAGTTTGTTTGACTCGTATTGCGGAGGCGTTTGCCTCATGTCCGGATAAATTAGACGAACTATGTAACCATGGACTTGTTACACAAGCTGCCTCACTTATTTCCACCAGCAGTACTGGAGGTGGACAGTCAACTCTTGGCTCAGCTACTTACACAGGATTAATCCGACTTCTTTCCACATGTGCAAGTGGATCTGCTTTAGGTGCAAAAACTTTGCTGCTTCTTGGGATCAGTGGGATTCTTAAAGATATATTATCTGGTTCTGGCGTGTCTACTAATGCATCTGTTTCACCTGCATTAAATAGACCACAAGAGCAGATTTTTGAGATAGTCAACTTGGCAAATGAGCTTCTACCTCCTCTACCTCGAGGAACTATTTCCTTTCCGCCCAACTTTAATTTGTTTGTGAAAGGACCCGTCATCAAGAAGCCATCTACTAGCGGTTCTGTGAAAGAAGAAGATCCAACTGATAGTGCTCCAGAAGTGTCAGCTCGTGAGAAACTCTTAAAGGATCAGCCTGAGCTCCTCCTCCAGTTTGGAATGGATCTCCTTCCTATTTTAATACAGATCTATGGTTCCAGTGTGAATGGTCCAGTACGTCATAAATGTCTCTCAGGAATTGGAAAATTGATGTACTTCAGCACTCCAGAGATGATACAGTCATTATTGAATGTGACTAATATAGCAAGTTTTCTAGCTGGTGTTTTGGCATGGAAAGATCCACATATTTTGATTCCTGCTCTCCAGATTGCTGAGATTCTTATGGAAAAGCTTCATGAAACATTTTCTAAGATGTTCCTTCGAGAGGGCGTTGTTTATGCTGTTGACCAGCTTATCTTGGCTAATAGCCAAAATACTTCTTCCCAAGCAGCTTCTGTTGAGAAGGATAACAACTCTGCATCTGGAACTTCATCACACACTCGACGTTACAGGCGGCGCAGTGGAAATATGAATTCGGATGGAAGTTCACTGGACGAAAACAAGAATTCTGTTTCTGGAAGTGGTGTTCCACAGGGTTCAGTGGAGGTTCCATCAATAAATTCTAATCTCCGAACTTCTGTAAGTTCCTACGCCAATGCTTTTAAGACTAAGTACTTCCCTTTAGATCCAGGAGATGTTGAAGTTGGAGTTACAGATGATCTCCTACGTTTGAAGAATCTTTGTGTCAAGTTGAATGCTGGTATTGATGATCAGAAGAGTAAATCAAAAGGAAAGTTGAAAGTGTCAGGGTCTCGCCTAGATGATATTATTACAAATAAGGAAGAGTATTTAACTGGCGTGATATCTGAAATGCTAATTGAATTGGGCAAAGATGATGGTGTTTCCACTTTTGAATTTATTGGTAGTGGTGTTGTTGGAGTTCTGCTTAACTACTTTTCTTGCGGATACTTTTCTAAAGGAAGAATTTCGGAAGGCGAGTTGCCAAAGCTTCGGCAACAAGTGCTTAAAAGGTTTAAATCATTTATTTCTGTTGCCCTTCCTACAAGCATTAATGAGGGGACAGTAGCTCCTATGACAGTCTTAGTTCAAAAGCTGCAGAGTGCTTTATCCTCGTTGGAGCGTTTTCCAGTTGTCTTGAGCCATTCTTCTAGATCATCCAGTGGTAGTGCGCGGCTTTCCTCTGGGCTAAGTGTATTATCTCAGCCATTTAAGTTACGACTTTGTCGAGCCCAGGGAGAAAAATCACTTCGTGATTATTCATCAAATATTGTTCTGATTGATCCATTGGCTAGTTTAGCAGCTGTTGAAGAATTTCTGTGGCCTAGAGTTCAGAAAAGTGAATCTGGTCAGAAACCTTCAGCATCTGGTGCAAACTCAGATTCAGGAACTACGCCTCCAGGAAATGTTGCTCCATCAGGGTTAAATTCAACCCCCAGTTCAACCACTCGTCGTTACTCTACTAGGTCTAGATCATCGATGACTATTGGAGAAAGAGCAGGGAAGGAAACTTCACAGGAGAAAAGCACATCAAAGGGGAAGGGGAAAGCTATTCTAAAGCCTGCCTGGGAGGAGAAGAGAGGCTTGCAAACTAGAAGTTCGACTCGTAGAAGAGCCGCTGTGGACAAGGATGCCCAAATGAAGCCAGTAAATGGAGAGACTACATCTGAGGATGAAGAATTGGACCTATCCTCCATCCAGATTGATGATTCTTTAGTGATTGAGGATGATGATATTTCTGATGATGAAGATGATGACCATGATGATGTGCTGCAGGATGACTCTCTTCCTCTTTGTATGCCTGAGAAGGTGCATGATGTCAAATTGGGAGACACAGTTGAAGATGGGGATGCTGGTCCGGCTACAAGTGATGGCCAGATTCATTCTACTTTTGGCTCTAGCAGTAGAGCTGCTACAGTCAGGGGTTCTAATTCTCCTGATCATAGGAGTGGCAATTCTTTTAGTTCGAGGGGAGGTATGTCATTTGCTGCTGCCGCTATGGCTGGGCTTGGACCAGCTAATGGCAGGGGTTTCCGTGGAGGTCGGGATCCACAGGGACGTCCTCTTTTCAGTGGCTCTAATGATAACCCAAAATTACTTTTTTCTTCTGGTGAGAAGCAGCTTGATAGGCATTTGACAATATATCAAGCTGTTCAACGCCAGCTTGTTTTGAATGAAGACGATGATGAGAGGTTTGCCGGTGCTGGCACTGATTTCTTATCTAATGATGGGAGCAGTTTATGGGGCGATATATATACTATCACGTATCAGAGGGCAGATAATCAATCTGAAAGAGCTGCTTTGGCTGGGGAATCAAGCTCCTCAAAATCTAAATCTACCAAATGTGTATCAACATCCAATTCAAATTCAGAGTCCCAATACCATCAAATGTCACTTTTAGATAGTATTTTACAAGGAAAACTTCCATGTGATTTTGACAAATCTAATCCTACATATGATATACTATCTTTATTGCGTGTACTTGAGGGATTGAATCAGCTTGCTCCTCGCTTAAGGGCACAGATTGTGTCGGATCATTTTGCAGAGGGAAAGATCACCACACTTGATGAACTGGGTGGAATTGGTGGAAAGGTTCCACATGAGGAATTTATCAACAGTAAGCTTACTCCCAAATTGGCCCGACAAATTCAGGATGCTCTTGCACTATGCAGTGGGAGTCTTCCCTCGTGGTGTTACCAATTGACTAAGGCATGCCCGTTCTTATTTCCTTTTGAGACCCGCCGACAATATTTCTATTCAACTGCATTTGGGCTGTCACGTGCATTATATCGGCTACATCAGCAGCAAGGAGCTGATGGTCTTGGAACAGTAAATGAACGAGAGGGAAGGGTTGGAAGATTACAGCGCCAGAAGGTTCGTGTCTCCCGTAATCGTATATTGGATTCTGCTGCGAAAGTTATGGAGATGTATTCTAGCCAGAAGGCTGTTCTTGAAGTAGAATATTTTGGTGAAGTGGGAACTGGATTAGGTCCTACCCTTGAGTTCTACACACTTTTAAGTCATGAATTGCAGAGGGCTGGACTTGGAATGTGGAGGTCTAATTCATTGCGAGAGTCAACAGATAGTGGTGAAGATGGACAACTTAGGAAGGCTAAAGGTGGCTCTAGGCTTACTTCTGATGTGGCCAATATTGATATCATCCAATCTCCTCTTGGGTTGTTTCCTCGACCTTGGCCACCAAATGCTGATTCTTCTGATGGCAGCCAATTTTCGAAGGTTATTGAATATTTCCGGCTTGTTGGTCGTGTGATGGCCAAAGCTCTACAAGATGGAAGACTATTGGATCTACCGCTCTCAACAGCATTTTATAAGCTTGTTCTTGGTCAAGATCTTGATTTACATGATATCCTCTCATTTGACCCTGAGCTTGGGAAGACTTTACAAGAATTGCAGGCTCTTGTTTGCCGGAAACAATATTTAGGATCGATAAATGGTGATAATCAAAATACAATTTCCAACTTGTCTTTCCGTGGGATTCCAGTTGAAGATCTCTGCTTGGATTTTACAGTTCCTGGTTATCCAGACTACGTTTTGAGGCCAGGAGATGAAACTGTTAATATTCATAACTTGGAGGAGTACATATCCTTAGTATTAGATGCTACTGTCAAGACTGGAATAATGCGGCAAATGGAAGCATTTACTGCAGGATTCAATCAGGTATTTGACATCACAGCATTACGCATATTCATTCCTCATGAGTTGGACCATTTACTATGTGGCCGTAGAGAATTGTGGAAGGCCGACACACTTGTCGATCATATTAAATTTGATCATGGATACACAGCCAAGAGTCCTGCAATAGTCAATTTTCTTGAGATTATGGGCGAATTCACACCAGAACAGCAGCGAGCATTCTGCCAGTTTGTTACAGGTGCACCTAGGCTTCCACCAGGTGGCCTTGCAGTGTTAAACCCAAGATTGACTATTGTGAGAAAGCACTCATCAACTGCAACTAACGTAGCAAACAGCGCTACGGGGGCTTCTGAATCAGCAGATGATGATTTGCCTAGTGTCATGACATGTGCCAATTACCTTAAGCTTCCTCCGTACTCGACCAAGCGGATCCTGTTTGTCTGCAATAGTTATGGTGGTGAAAGGTGCCTTTTGGCGGCCGCCGTCAGAGAGCAGCAGTTCCTTCCTTCTACTTTTGACGAACAAGAAGCGCAAGCTATGGCTAACGAAGAAGACGATCTCGATCTTCTCCTTTCTCTTCAAGATAAAGTTGATGAAACTCCTCCTGGAACTCCGCCTCATTCCTCAGATCTTCTATCTGACGATGAATCACCAAGACGAGCAGGTCCTGCGGATATGTCTATCTTCAGAAACGCTGTCAAAGACTGCCTTGATTATGACCACATACCAACTGAAAAGACTGGAAAAACGAACCGGTCTAAGGCCTCTAATGATGTTTCAATCGAGAAGTTTTCTGGTTTGCGAATGAGGAATCAACTGGTGGCACCTGCTGAGCTTCGCGATCGTTTTTCTGACATTCGCTTTGTTCGTTTGTCTACCATAAAGAATCTGTTGGTTGGGGACACCCTTTCAGGCTGTTGGGTAACTGTCGGAGTGTTGACTGAGAAAGGAAGTCCAAAAACAAGCTCTACAGGGAAAGCTTATTGCATCTGGAAACTTAGTTGTTTAGATGAAAACACTGTTTCTGTTTTCTTATTTGGTGACGCTTATAAAAGAAATTGCAAGGAGCTGGCTGGAACAGTTTTTGCGCTTTTTAACTCTACTGTACGAAAGGATGCAACGGGCATGGGGTTTTCTTTAAGTGTGTATCAACCAAGCCAATTGTTAAAGATGGGCACTTCAGATGACTATGGAGTATGCAAGGGGAAGAAGAAGGATGGCATTGCTTGTACAACCGTAATAAATAGGCGACGTGGCATATACTGTAAATATCATAAAGCAAAGGCATCAGAAAAATATTCCACAACCACACGAACTGAGCTCAAAGGAGGGAATCTGAGGACTGCATTCAGAGATTATCATCACAAGCCAGAAGGAGTTTACATGGTAGATCCGCTAGCTGGTAAAGTGACTTCTAAGAAGCCAGCACAGCCGGTAAAACTGTTGTCTGTGGAAGGCCTGAAAAGGGCATTGAGCAATGCAGACAAAGTGACCACCAATTCACACTCACAAGGGAAAAGATTCCTTGCTGAGATCACAGGGAAACTTACTAGTAAAAGTGTAAATAAAGAATTAACCAAACAAAGTCAGCAGAGAATCAGTTCAGAGAAGACGTCAATTGTGAAGTCATCCACCATGAAACTGGATTCAAGAGTTGAAAACCAACAACCAGATCCAAAAAGAAAGAAAACCGACCATACTCCGGTAGACAAAACCACAAAAGAAACAGGAAAGATGATAGAGTTAGATTATGTTAGTTCAGATGATGATATCGACCTTATATTCACCCGATAA 6978 43.84 METRSRKRAEASSAAPSSSSSGPTTRSTKRARLSGTSPSNLAASTLSITTRSRSTRTQEPSATSTPMDSTNESSGSRRRGKNSDKENSDKGKEKEHEVRIGDRERNAEQSFGLNIEGSGGGEDDDNDSEGGMGVLQQNLSTASSALQGLLRKLGAGLDDLLPSSAIASASSSQQRGRLKKILSGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDAKVLEHASVCLTRIAEAFASCPDKLDELCNHGLVTQAASLISTSSTGGGQSTLGSATYTGLIRLLSTCASGSALGAKTLLLLGISGILKDILSGSGVSTNASVSPALNRPQEQIFEIVNLANELLPPLPRGTISFPPNFNLFVKGPVIKKPSTSGSVKEEDPTDSAPEVSAREKLLKDQPELLLQFGMDLLPILIQIYGSSVNGPVRHKCLSGIGKLMYFSTPEMIQSLLNVTNIASFLAGVLAWKDPHILIPALQIAEILMEKLHETFSKMFLREGVVYAVDQLILANSQNTSSQAASVEKDNNSASGTSSHTRRYRRRSGNMNSDGSSLDENKNSVSGSGVPQGSVEVPSINSNLRTSVSSYANAFKTKYFPLDPGDVEVGVTDDLLRLKNLCVKLNAGIDDQKSKSKGKLKVSGSRLDDIITNKEEYLTGVISEMLIELGKDDGVSTFEFIGSGVVGVLLNYFSCGYFSKGRISEGELPKLRQQVLKRFKSFISVALPTSINEGTVAPMTVLVQKLQSALSSLERFPVVLSHSSRSSSGSARLSSGLSVLSQPFKLRLCRAQGEKSLRDYSSNIVLIDPLASLAAVEEFLWPRVQKSESGQKPSASGANSDSGTTPPGNVAPSGLNSTPSSTTRRYSTRSRSSMTIGERAGKETSQEKSTSKGKGKAILKPAWEEKRGLQTRSSTRRRAAVDKDAQMKPVNGETTSEDEELDLSSIQIDDSLVIEDDDISDDEDDDHDDVLQDDSLPLCMPEKVHDVKLGDTVEDGDAGPATSDGQIHSTFGSSSRAATVRGSNSPDHRSGNSFSSRGGMSFAAAAMAGLGPANGRGFRGGRDPQGRPLFSGSNDNPKLLFSSGEKQLDRHLTIYQAVQRQLVLNEDDDERFAGAGTDFLSNDGSSLWGDIYTITYQRADNQSERAALAGESSSSKSKSTKCVSTSNSNSESQYHQMSLLDSILQGKLPCDFDKSNPTYDILSLLRVLEGLNQLAPRLRAQIVSDHFAEGKITTLDELGGIGGKVPHEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLHQQQGADGLGTVNEREGRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHELQRAGLGMWRSNSLRESTDSGEDGQLRKAKGGSRLTSDVANIDIIQSPLGLFPRPWPPNADSSDGSQFSKVIEYFRLVGRVMAKALQDGRLLDLPLSTAFYKLVLGQDLDLHDILSFDPELGKTLQELQALVCRKQYLGSINGDNQNTISNLSFRGIPVEDLCLDFTVPGYPDYVLRPGDETVNIHNLEEYISLVLDATVKTGIMRQMEAFTAGFNQVFDITALRIFIPHELDHLLCGRRELWKADTLVDHIKFDHGYTAKSPAIVNFLEIMGEFTPEQQRAFCQFVTGAPRLPPGGLAVLNPRLTIVRKHSSTATNVANSATGASESADDDLPSVMTCANYLKLPPYSTKRILFVCNSYGGERCLLAAAVREQQFLPSTFDEQEAQAMANEEDDLDLLLSLQDKVDETPPGTPPHSSDLLSDDESPRRAGPADMSIFRNAVKDCLDYDHIPTEKTGKTNRSKASNDVSIEKFSGLRMRNQLVAPAELRDRFSDIRFVRLSTIKNLLVGDTLSGCWVTVGVLTEKGSPKTSSTGKAYCIWKLSCLDENTVSVFLFGDAYKRNCKELAGTVFALFNSTVRKDATGMGFSLSVYQPSQLLKMGTSDDYGVCKGKKKDGIACTTVINRRRGIYCKYHKAKASEKYSTTTRTELKGGNLRTAFRDYHHKPEGVYMVDPLAGKVTSKKPAQPVKLLSVEGLKRALSNADKVTTNSHSQGKRFLAEITGKLTSKSVNKELTKQSQQRISSEKTSIVKSSTMKLDSRVENQQPDPKRKKTDHTPVDKTTKETGKMIELDYVSSDDDIDLIFTR 2325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24771473 24792127 + ClG42_02g0122400.10 Clacu02g1224 243292

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g1224 2325 Gene3D Hect, E3 ligase catalytic domain 1762 1877 - -
Clacu02g1224 2325 Gene3D - 179 660 IPR011989 -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 1083 1167 - -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 508 528 - -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 1275 1299 - -
Clacu02g1224 2325 Pfam Primase zinc finger 2120 2162 IPR015408 GO:0005634(InterPro)|GO:0006260(InterPro)
Clacu02g1224 2325 Pfam HECT-domain (ubiquitin-transferase) 1583 1873 IPR000569 GO:0004842(InterPro)
Clacu02g1224 2325 Pfam MCM10 OB-fold 1991 2117 IPR055065 -
Clacu02g1224 2325 SMART hect_3 1478 1887 IPR000569 GO:0004842(InterPro)
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 957 1071 - -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 680 708 - -
Clacu02g1224 2325 FunFam E3 ubiquitin-protein ligase UPL3 1408 1652 - -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 2251 2303 - -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 74 106 - -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 1532 1551 - -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 2281 2303 - -
Clacu02g1224 2325 SUPERFAMILY ARM repeat 177 646 IPR016024 -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 1109 1123 - -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 511 528 - -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 1 134 - -
Clacu02g1224 2325 Gene3D Hect, E3 ligase catalytic domains 1407 1653 - -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 1011 1054 - -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 10 73 - -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 1133 1167 - -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 2251 2280 - -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 957 1010 - -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 653 708 - -
Clacu02g1224 2325 Gene3D - 1980 2154 IPR012340 -
Clacu02g1224 2325 ProSiteProfiles HECT domain profile. 1491 1873 IPR000569 GO:0004842(InterPro)
Clacu02g1224 2325 CDD HECTc 1467 1873 IPR000569 GO:0004842(InterPro)
Clacu02g1224 2325 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 135 1873 IPR045322 GO:0000209(PANTHER)|GO:0006511(InterPro)|GO:0043161(PANTHER)|GO:0061630(InterPro)|GO:0061630(PANTHER)
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 1083 1101 - -
Clacu02g1224 2325 SMART arm_5 209 250 IPR000225 GO:0005515(InterPro)
Clacu02g1224 2325 SMART arm_5 335 373 IPR000225 GO:0005515(InterPro)
Clacu02g1224 2325 SMART arm_5 292 332 IPR000225 GO:0005515(InterPro)
Clacu02g1224 2325 SUPERFAMILY Hect, E3 ligase catalytic domain 1459 1873 IPR035983 GO:0004842(InterPro)
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 1924 1951 - -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 653 669 - -
Clacu02g1224 2325 FunFam HECT ubiquitin protein ligase family protein KAK 171 485 - -
Clacu02g1224 2325 MobiDBLite consensus disorder prediction 1183 1207 - -
Clacu02g1224 2325 FunFam DNA replication licensing factor mcm10 1981 2155 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g1224 K10590 - - csv:101218793 3315.01
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g1224 Clacu-Chr2:24771473 Clacu10g2028 Clacu-Chr10:33743322 2.60E-257 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g154 . . . . . Bpe12g00120 . . . . Cma02g00257 Cma20g00754 . Car20g00655 . . . . . . . . . . . . . . . . . . . . Cone10ag1234 . . Chy11g00258 . Blo04g00566 Blo13g00505 Bda15g01035 . Bpe15g00815 . Bma03g00607 Bma08g00752 Sed01g0197 Cmo02g00253 Cmo20g00750 . . . . Cpe16g00315 Cpe05g01375 Bhi10g01854 Tan05g1142 Cmetu11g0032 . Hepe08g0290 . . Cla02g01165 Cam02g1242 Cec02g1251 Cco02g1292 Clacu02g1224 Cmu02g1192 Cre02g1504 . Csa02g01389 . Cme11g00383
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Clacu08g0027 . 106 784 Core DNA Replication Machinery Family AT4G14700 67.0 1.2e-265 912.9
Clacu08g0027 . 106 784 Core DNA Replication Machinery Family AT4G12620 69.3 6.3e-275 943.7
Clacu08g1734 . 55 408 Core DNA Replication Machinery Family AT2G37560 65.0 3.4e-137 485.0
Clacu07g0481 . 9 410 Core DNA Replication Machinery Family AT2G01120 64.8 3.5e-152 535.0
Clacu06g0361 . 3 531 Core DNA Replication Machinery Family AT4G29910 58.0 9.1e-172 600.5
Clacu11g0941 . 1 283 Core DNA Replication Machinery Family AT1G26840 65.7 1.9e-93 339.3
Clacu09g2284 . 68 861 Core DNA Replication Machinery Family AT1G79150 59.4 4.8e-246 847.8
Clacu10g1298 . 8 940 Core DNA Replication Machinery Family AT1G44900 75.6 0.0e+00 1354.0
Clacu01g2525 . 120 694 Core DNA Replication Machinery Family AT5G46280 80.9 1.4e-268 922.2
Clacu02g0508 . 1 845 Core DNA Replication Machinery Family AT2G16440 76.2 0.0e+00 1153.7
Clacu11g0494 . 1 735 Core DNA Replication Machinery Family AT2G07690 78.4 0.0e+00 1112.4
Clacu01g2678 . 7 801 Core DNA Replication Machinery Family AT5G44635 73.3 0.0e+00 1152.9
Clacu09g0515 . 4 722 Core DNA Replication Machinery Family AT4G02060 85.3 0.0e+00 1219.9
Clacu02g2016 . 55 521 Core DNA Replication Machinery Family AT2G29680 61.9 5.3e-163 571.2
Clacu02g2016 . 37 482 Core DNA Replication Machinery Family AT1G07270 58.8 2.5e-143 505.8
Clacu09g0874 . 1 593 Core DNA Replication Machinery Family AT3G25100 76.2 1.1e-257 885.9
Clacu10g2027 . 12 783 Core DNA Replication Machinery Family AT3G09660 72.6 0.0e+00 1081.2
Clacu09g1643 . 9 629 Core DNA Replication Machinery Family AT2G14050 78.9 2.4e-285 978.0
Clacu02g1224 . 1908 2318 Core DNA Replication Machinery Family AT2G20980 56.4 1.1e-118 423.7
Clacu09g0268 . 1 192 Core DNA Replication Machinery Family AT1G80190 67.5 1.0e-72 270.0
Clacu11g0765 . 635 793 Core DNA Replication Machinery Family AT1G19080 69.8 2.1e-61 232.3
Clacu11g0765 . 635 793 Core DNA Replication Machinery Family AT3G55490 69.8 2.1e-61 232.3
Clacu05g0167 . 15 164 Core DNA Replication Machinery Family AT5G49010 65.3 1.5e-49 193.0
Clacu02g1274 . 1 1538 Core DNA Replication Machinery Family AT5G67100 60.4 0.0e+00 1750.3
Clacu04g1224 . 151 773 Core DNA Replication Machinery Family AT1G67630 60.7 4.3e-215 744.6
Clacu06g0210 . 1 446 Core DNA Replication Machinery Family AT1G67320 64.5 5.8e-183 637.5
Clacu08g0161 . 48 491 Core DNA Replication Machinery Family AT5G41880 65.0 1.3e-176 616.3
Clacu01g1579 . 1 1086 Core DNA Replication Machinery Family AT5G63960 80.7 0.0e+00 1797.3
Clacu10g1736 . 1 419 Core DNA Replication Machinery Family AT2G42120 75.9 3.2e-196 681.4
Clacu06g0210 . 1 446 Core DNA Replication Machinery Family AT1G67320 64.5 5.8e-183 637.5
Clacu01g0553 . 1 127 Core DNA Replication Machinery Family AT1G09815 60.8 3.2e-37 151.4
Clacu02g2254 . 1 2095 Core DNA Replication Machinery Family AT1G08260 71.5 0.0e+00 2981.8
Clacu09g2081 . 7 2057 Core DNA Replication Machinery Family AT1G08260 68.7 0.0e+00 2819.3
Clacu02g2254 . 25 2202 Core DNA Replication Machinery Family AT2G27120 68.1 0.0e+00 2948.3
Clacu09g2081 . 29 2148 Core DNA Replication Machinery Family AT2G27120 65.8 0.0e+00 2773.0
Clacu04g1335 . 638 1059 Core DNA Replication Machinery Family AT5G22110 67.0 8.2e-169 590.5
Clacu02g2304 . 50 974 Core DNA Replication Machinery Family AT5G22010 63.0 1.1e-304 1042.7
Clacu10g0345 . 1 331 Core DNA Replication Machinery Family AT1G63160 91.0 3.7e-173 604.4
Clacu04g0492 . 1 354 Core DNA Replication Machinery Family AT5G27740 85.3 1.1e-178 622.9
Clacu11g1775 . 66 384 Core DNA Replication Machinery Family AT1G21690 81.6 2.1e-144 508.8
Clacu08g0732 . 1 363 Core DNA Replication Machinery Family AT1G77470 75.5 2.5e-154 542.0
Clacu11g0299 . 26 607 Core DNA Replication Machinery Family AT2G06510 67.9 6.7e-245 843.6
Clacu10g0107 . 32 703 Core DNA Replication Machinery Family AT2G06510 50.4 9.8e-196 680.2
Clacu06g1663 . 1 623 Core DNA Replication Machinery Family AT5G08020 68.3 9.8e-249 856.3
Clacu10g0107 . 10 811 Core DNA Replication Machinery Family AT5G45400 50.2 8.7e-227 783.9
Clacu06g1663 . 1 618 Core DNA Replication Machinery Family AT5G61000 66.1 7.8e-241 830.1
Clacu10g0107 . 5 797 Core DNA Replication Machinery Family AT4G19130 53.7 2.2e-224 775.8
Clacu03g1825 . 1 404 Core DNA Replication Machinery Family AT5G26680 82.5 1.0e-188 656.4
Clacu05g0312 . 1 1110 Core DNA Replication Machinery Family AT1G08840 52.3 8.9e-298 1020.0
Clacu07g1578 . 1 297 Core DNA Replication Machinery Family AT2G25100 67.0 1.3e-115 412.9
Clacu02g2212 . 2 740 Core DNA Replication Machinery Family AT1G08130 69.4 8.2e-288 986.5
Clacu02g2212 . 162 740 Core DNA Replication Machinery Family AT1G49250 69.3 2.8e-233 805.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003449 1 1 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 2 2 2 2 1 1 3 4 2 48