Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g1383 ATGAAAATGGTACTCGAAGTTGCGGTCAAGGCTGCCACTGGTGCACCTGATGTGCTTGGGGACTGCCCTTTCTGCCATAGAGTTCTCTTAACTTTGGAGGAGAAGAAAGTTCCTTACAAATGGCATCTCATCAATCTATCCGAAAAACCCAGTTGGTTATTTGAAGTGAGCCCAGAAGGGAAGGTGCCGTTGGCGAAGTTTGATGGCAAATGGGTTCCTGATTCTGATGTCATAGTGGGGATTCTTGAGGAGAAGTATCCAGAGCCTTCTCTTGTTACTCCTCCTGAATTTTCTTCTGTGGGATCAAAGATGTTTGGTGCTTTTGTAAAATTCTTGTTAAGCAAGGACCCAAATGATGGTTCAGAGCAGGCTTTCCTTGAAGAGTTGAAGGCGCTCAATGAGCATCTTAAGGCTCATGGTCCTTATGTTGCTGGAGAGAAGGTAACTGCTGTTGATTTGAGCCTGGCACCAAAGTTGTACCATGTTGATGTTGCTCTTGGCCATTTTAAGAAGTGGTCTATCCCTAAAGACTTGCCCAGTTTAATCGCCTACAAGGAGGCTTCGCTAGCTTCTCAGATTGCCTACAGTTTGAAACCTATGATTCTGTTGCTTTACACTCGAGAATCTTTCGTGAAGACGAAAACTGCCCCGGAATATGTAATTGCTGGATGGGGGACCAAGGTGAATCCTGCATGA 696 45.26 MKMVLEVAVKAATGAPDVLGDCPFCHRVLLTLEEKKVPYKWHLINLSEKPSWLFEVSPEGKVPLAKFDGKWVPDSDVIVGILEEKYPEPSLVTPPEFSSVGSKMFGAFVKFLLSKDPNDGSEQAFLEELKALNEHLKAHGPYVAGEKVTAVDLSLAPKLYHVDVALGHFKKWSIPKDLPSLIAYKEASLASQIAYSLKPMILLLYTRESFVKTKTAPEYVIAGWGTKVNPA 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27027525 27030787 - ClG42_02g0138300.10 Clacu02g1383 243451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g1383 231 Gene3D - 92 231 - -
Clacu02g1383 231 SUPERFAMILY GST C-terminal domain-like 86 224 IPR036282 -
Clacu02g1383 231 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 5 226 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
Clacu02g1383 231 CDD GST_N_family 22 79 - -
Clacu02g1383 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 12 90 IPR004045 -
Clacu02g1383 231 FunFam Glutathione S-transferase DHAR3 chloroplastic 3 91 - -
Clacu02g1383 231 SUPERFAMILY Thioredoxin-like 21 89 IPR036249 -
Clacu02g1383 231 Pfam Glutathione S-transferase, C-terminal domain 121 184 - -
Clacu02g1383 231 Pfam Glutathione S-transferase, N-terminal domain 22 84 IPR004045 -
Clacu02g1383 231 Gene3D Glutaredoxin 3 91 - -
Clacu02g1383 231 SFLD Glutathione Transferase (cytosolic) 22 187 IPR040079 -
Clacu02g1383 231 FunFam Glutathione S-transferase DHAR3, chloroplastic 92 230 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g1383 Clacu-Chr2:27027525 Clacu05g1301 Clacu-Chr5:13237473 3.50E-69 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g1383 K21888 - csv:101203666 342.813