Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g1547 ATGGGAGGTTTGAGTGAGGGTCTAACACAGTTGCTGATACCTGCTGCTGCTCTGCTTGGTATTGGATTTGCCCTTCTTCAATGGCTTTTGGTTTCAAGAGTTAAGGTTTCTAGCTACCCTGATGATGAAAGCCAAGAAAACAACTTGATTGAAGGAGGACAAGAGGAAGGTATTGATGATGTCGAGGTTCTCGCAAAGTGTGCCGAAATCCAGAAGGCAATTTCTGTTGGAGCAACCTCATTTTTATTCACCCAGTATAAATACCTTGTTGTCTTCATGGGAGTATTTGGAGTCATCATTTTTCTGTTTCTTGGTTCTGTTAAGAGATTCAGCACCAAAAGTGAACCTTGCACATACAACAAGGGACAGATGTGTAAACCAGCTCTAGCCAATGCCATTTTTAGCACAATTGCCTTCTTGCTAGGTGCTCTCACCTCAGTTCTATCTGGTTTCCTTGGAATGAAGATTGCAACTTATGCCAATGCACGAACGAGTCTAGAAGCACGGAAAGGCATTGGAAGAGCATTCGTTATTGCTTTTCGCTCCGGTGCTGTGATGGGATTCCTTCTAGCTGCCAATGGCCTCCTTGTTTTATATGCCTCCATCAATTTGTTTAAGCTGTATTATGGCGATGATTGGGAAGGACTGTACGAATCTATCACCGGCTACGGTCTTGGAGGTTCTTCAATGGCGCTTTTTGGAAGAGTTGGGGGCGGCATATACACAAAAGCAGCTGATGTTGGAGCTGATCTTGTAGGGAAAATTGAAAAGAATATTCCTGAAGACGATCCACGAAATCCTGCTGTCATAGCTGACAATGTGGGTGACAATGTAGGAGATATTGCAGGAATGGGATCTGACTTATTTGGATCTTATGCAGAATCAACCTGTGCTGCACTTTTCGTGGCATCGATATCGTCCTTCGGCTTTACACATAATTATGCAGCCATGTCCTACCCTCTACTTGTAAGCTCAATGGGAATTGTGATTTGCTTAATAACTACACTTTTTGCAACTGACCTCATTGAGATTAAGAAAGTGAGCGAAATCGAACCGTCATTAAAACGACAACTTCTTATCTCCACCGTGCTGATGACAGTAGGGGTAGCTTTAGTTAGCTTCATTGCTTTGCCTTCAAAATTCACTCTTTACGATTTCGGCATCGATAAGGTCGTAAAGAACTGGCACATTTTCTTTTGTGTGGTGACAGGATTGTGGGCAGGACTTGTTATTGGGTACACAACTGAGTATTACACTAGCAATGCTTACAGTCCAGTGCAGGATGTGGCTGATTCTTGCAGAACCGGTGCCGCAACGAACGTAATATTTGGATTAGCTCTCGGTTACAAATCCGTCATCATTCCCATATTTTCAATCGCTTTATCCATTTACGTGAGCTTCCGCTTGGGAGCCATGTATGGTATTGCAATGGCTGCTTTGGGAATGCTTAGCACCATTGCCACTGGTCTAGCCATTGATGCTTATGGTCCAATAAGTGATAATGCAGGTGGAATAGCCGAAATGGCTGGAATGAGCCACGAGATACGCGAAAGAACCGATGCTTTAGATGCTGCAGGAAACACGACTGCAGCCATCGGAAAGGGCTTTGCCATTGGATCAGCTGCTCTTGTTTCCCTCGCCTTGTTCGGCGCCTTCGTGAGCCGAGCAGGCATCGAAACAGTCAACGTCATGAACCCGAAAGTCTTCATTGGGTTGATAGTAGGTGCAATGCTTCCATACTGGTTTTCAGCCATGACAATGAAGAGTGTTGGGAGTGCAGCACTGAAGATGGTGGAGGAAGTTCGACGACAATTCAACTCCATCCCAGGGCTGATGGAAGGCAGGACGAAGCCGGACTATGCAAATTGTGTGAGGATATCGACCGATGCTTCGCTTAGGGAGATGATCCCACCTGGTGCTCTTGTTTTGGTAACACCACTCATTGCTGGAACATTCTTTGGAGTTGAAACTCTTGCTGGACTTCTGGCTGGTTCCCTTGTTTCTGGAGTGCAGGTTGCTATCTCTGCTTCAAACACAGGTGGGGCTTGGGATAATGCAAAAAAGTACATAGAGGCAGGAAGAAGTGAACATGCTAAAGCACTTGGTCCTAAAGGGTCAGATGCTCACAAGGCAGCTGTGATAGGGGACACAATTGGGGATCCTCTCAAAGACACTTCTGGCCCATCACTTAATATTCTCATCAAGCTTATGGCTGTTGAGTCTTTGGTTTTTGCCCCTTTTTTTGCTGCTCATGGTGGCCTCATCTTCAACCATATATAA 2280 45.18 MGGLSEGLTQLLIPAAALLGIGFALLQWLLVSRVKVSSYPDDESQENNLIEGGQEEGIDDVEVLAKCAEIQKAISVGATSFLFTQYKYLVVFMGVFGVIIFLFLGSVKRFSTKSEPCTYNKGQMCKPALANAIFSTIAFLLGALTSVLSGFLGMKIATYANARTSLEARKGIGRAFVIAFRSGAVMGFLLAANGLLVLYASINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKIEKNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESTCAALFVASISSFGFTHNYAAMSYPLLVSSMGIVICLITTLFATDLIEIKKVSEIEPSLKRQLLISTVLMTVGVALVSFIALPSKFTLYDFGIDKVVKNWHIFFCVVTGLWAGLVIGYTTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFSIALSIYVSFRLGAMYGIAMAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHEIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGIETVNVMNPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNSIPGLMEGRTKPDYANCVRISTDASLREMIPPGALVLVTPLIAGTFFGVETLAGLLAGSLVSGVQVAISASNTGGAWDNAKKYIEAGRSEHAKALGPKGSDAHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLIFNHI 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28867954 28873940 + ClG42_02g0154700.10 Clacu02g1547 243615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g1547 759 PIRSF H+-PPtase 19 757 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Clacu02g1547 759 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 7 749 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Clacu02g1547 759 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 12 756 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Clacu02g1547 759 Pfam Inorganic H+ pyrophosphatase 43 744 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Clacu02g1547 759 NCBIfam V-type H(+)-translocating pyrophosphatase 9 754 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g1547 Clacu-Chr2:28867954 Clacu06g1257 Clacu-Chr6:23534622 0.00E+00 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g1547 K23025 - csv:101205277 1420.22