Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g1708 ATGGCGGCTCGGAGGATATCCTCTCTCTTATCTCGTTCCCTTCCTTCTTCGTCGGCTCTCCTTTCCAAAGGTAGTAGGCCTTTCGGTGGCAGAACAACTGCCAAATATAGCACTGCAGCTGCTGTTGAAGATCCTATTACTCCATCTGTGAAAGTGAATTACACCCAGTTGTTAATCAATGGACAGTTTGTGGATTCAGTCTCAGGAAAAACTTTTCCTACTTTGGATCCAAGGACTGGGGGAGTCATTGCAAATGTTGCTGAAGGTGATGCTAAAGATGTTGATCTTGCAGTTTCTGCTGCACGCAGGGCGTTTGATGAAGGTCCTTGGCCTAGAATGACTGCTTATGAAAGATCGAAGATAATTTTGCGGTTTGCTGATTTGGTTGAAAAGCATGCCGATGAAGTTGCAGCACTCGAAACATGGGATAATGGTAAAACATATGAACAATCAGCAAAAATTGAAGTCCCGATGTTCGTACGCCTCTTTCGATACTATGGCGGATGGGCGGATAAGATCCATGGACTCACAGTTCCTGCTGATGGCTCGTATCATGTGCAGACATTGCATGAACCGATTGGCGTGGCGGGTCAGATCATTCCATGGAACTTCCCTCTGCTTATGTTTGCTTGGAAGGTTGGTCCAGCGTTAGCATGTGGGAATACTATTGTTCTGAAGACAGCTGAGCAGACACCTTTGTCTGCTCTCTTTGTGGCTAAGCTATTGCATGAGGCTGGACTTCCTGAGGGCGTTCTGAATATTGTTTCGGGTTATGGACCCACTGTTGGTGCTGCTATTGCCAGTCATATGGAAGTTGATAAGCTTGCTTTTACCGGATCAACTGAAACAGGGAAGATTGTACTTGAATTAGCTGCAAAAAGCAATTTGAAGCCAGTAACGTTGGAGCTTGGTGGAAAATCCCCTTTCATTGTATGTGAGGATGCTGATGTAGACAAGGCTGTGGAGATGGCACACTTTGCTCTCTTCTTCAACCAGGGACAATGTTGCTGTGCTGGTTCTCGTACTTTCGTTCATGAAAAAGTATTCGACGAGTTTCTAGAAAAAGCAAGAAAACGAGCTGCGAACCGCGTTGTTGGTGATCCTTTCCTAGGTGGAATTGAGCAAGGTCCTCAGGTCGATGAAGAACAATTCAAAAAGATATTGAAATATATAAAACTTGGGATTGAAGGAGGAGCCACTCTTGAAGCAGGAGGAGAAAGGTTTGGTTCCAAGGGTTACTATGTCCAACCAACAGTTTTCTCAAATGTCAAGGATGACATGAAAATTGCACAGGAGGAGATTTTTGGTCCTGTACAAACAATCTTGAAATACAAAGAGATTGATGAGGTGATAAGGAGGGCAAATGCTAGTCCTTATGGGCTGGCTGCTGGAGTGTTTACTCAAAATATCGACACAGCTAACCGGTTGACACGTGCGTTGAGAGTAGGGTCAGTATGGATCAATTGCTTTGATATATTTGATGCTGCAGTTCCTTTTGGAGGGTACAAGATGAGTGGACATGGGAGAGAAAAGGGAATTTACAGCCTTAGCAATTACCTGCAAGTGAAGGCTGTTGTGACTCCTTTGGAAAAGCCTGCTTGGCTTTAG 1608 44.65 MAARRISSLLSRSLPSSSALLSKGSRPFGGRTTAKYSTAAAVEDPITPSVKVNYTQLLINGQFVDSVSGKTFPTLDPRTGGVIANVAEGDAKDVDLAVSAARRAFDEGPWPRMTAYERSKIILRFADLVEKHADEVAALETWDNGKTYEQSAKIEVPMFVRLFRYYGGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALFVAKLLHEAGLPEGVLNIVSGYGPTVGAAIASHMEVDKLAFTGSTETGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHFALFFNQGQCCCAGSRTFVHEKVFDEFLEKARKRAANRVVGDPFLGGIEQGPQVDEEQFKKILKYIKLGIEGGATLEAGGERFGSKGYYVQPTVFSNVKDDMKIAQEEIFGPVQTILKYKEIDEVIRRANASPYGLAAGVFTQNIDTANRLTRALRVGSVWINCFDIFDAAVPFGGYKMSGHGREKGIYSLSNYLQVKAVVTPLEKPAWL 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 30583503 30586927 + ClG42_02g0170800.10 Clacu02g1708 243776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g1708 535 FunFam Aldehyde dehydrogenase, putative 497 523 - -
Clacu02g1708 535 SUPERFAMILY ALDH-like 51 528 IPR016161 GO:0016491(InterPro)
Clacu02g1708 535 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 59 330 - -
Clacu02g1708 535 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491(InterPro)
Clacu02g1708 535 CDD ALDH_F2BC 52 527 - -
Clacu02g1708 535 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 301 308 IPR029510 GO:0016491(InterPro)
Clacu02g1708 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 494 IPR016163 GO:0016620(InterPro)
Clacu02g1708 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 59 523 IPR016162 GO:0016491(InterPro)
Clacu02g1708 535 Pfam Aldehyde dehydrogenase family 63 525 IPR015590 GO:0016491(InterPro)
Clacu02g1708 535 FunFam Mitochondrial aldehyde dehydrogenase 2 307 496 - -
Clacu02g1708 535 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 50 527 - GO:0004029(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g1708 Clacu-Chr2:30583503 Clacu06g1798 Clacu-Chr6:28471426 8.10E-247 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g1708 K00128 - csv:101202756 977.237