Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu02g1735 | ATGATGGCGAACCGGTGGTGGACCTCCGGCCAGATGGGTCTTCCGGGAGTTGATCATACATCGACCAGCTCCTCCACCATGAGAAAACCAGATCTGGGAATCTCCATGAACGACAACGGTGGACCCGTTAACAGCGGTGGTGTCGATGACGATGACGATAGAGATAACGGTGGTGATGAACCTAAAGAAGGAGCTGTCGAAGTTCCAACGCGCCGTCCTCGTGGCCGTCCACCGGGCTCCAAGAATAAGCCTAAGCCTCCTATCTTCGTTACTAGAGATAGCCCTAATGCCCTAAAAAGCCATGTCATGGAGATTTCTAATGGAGCTGATATCGCGGAAAGCATTGCTCAATTTGCTCGACGGCGACAGAGAGGTGTTTCTGTGCTTAGTGGCAGCGGTACGGTAACGAATGTCACACTCCGGCAACCATCTGCGCCCGGTGCAGTCTTAACCCTTCACGGCCGGTTCGAGATTCTTTCTTTGACTGGAACTTTCCTCCCCGGACCAGCCCCACCCGGGTCAACTGGACTAACAATCTACTTGGCCGGTGGACAAGGGCAGGTGGTGGGTGGCAGCGTAGTCGGGCCACTCACCGCTGCCGGCCCAGTGATGGTGATCGCTGCAACGTTTTCCAACGCGACATACGAAAGATTACCTTTGGAAGAGGAAGAAGAAGGCGGCGGAGTAGGAGCACAAGGGCACACATCAGCAGGCGGTGGTGCAGGCGACGGTTCGCCACAAGGCATCGGAGGCGGAGGCGGAGTCGGAGATCCGTCAGCTATGCCTCCGCTGTACAATTTACCGCCGAACTTGCTACCGAATGGCGGCGGCGGGCAGATGAATCAGGAGGCTTATTCGTGGGCTCACGGCGGCCGGCCGTCGTTTTAA | 888 | 56.53 | MMANRWWTSGQMGLPGVDHTSTSSSTMRKPDLGISMNDNGGPVNSGGVDDDDDRDNGGDEPKEGAVEVPTRRPRGRPPGSKNKPKPPIFVTRDSPNALKSHVMEISNGADIAESIAQFARRRQRGVSVLSGSGTVTNVTLRQPSAPGAVLTLHGRFEILSLTGTFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGPLTAAGPVMVIAATFSNATYERLPLEEEEEGGGVGAQGHTSAGGGAGDGSPQGIGGGGGVGDPSAMPPLYNLPPNLLPNGGGGQMNQEAYSWAHGGRPSF | 295 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 30844980 | 30846048 | + | ClG42_02g0173500.10 | Clacu02g1735 | 243803 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu02g1735 | 295 | ProSiteProfiles | PPC domain profile profile. | 95 | 233 | IPR005175 | - | |
Clacu02g1735 | 295 | Gene3D | - | 99 | 225 | - | - | |
Clacu02g1735 | 295 | MobiDBLite | consensus disorder prediction | 1 | 95 | - | - | |
Clacu02g1735 | 295 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 96 | 223 | - | - | |
Clacu02g1735 | 295 | PIRSF | ESCAROLA | 12 | 295 | IPR014476 | GO:0003680(InterPro) | |
Clacu02g1735 | 295 | MobiDBLite | consensus disorder prediction | 14 | 42 | - | - | |
Clacu02g1735 | 295 | FunFam | AT-hook motif nuclear-localized protein | 98 | 225 | - | - | |
Clacu02g1735 | 295 | CDD | DUF296 | 99 | 182 | IPR005175 | - | |
Clacu02g1735 | 295 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 100 | 211 | IPR005175 | - | |
Clacu02g1735 | 295 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 38 | 293 | IPR014476 | GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Clacu02g1735 | 295 | MobiDBLite | consensus disorder prediction | 221 | 278 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu02g0323 | Clacu-Chr2:2942137 | Clacu02g1735 | Clacu-Chr2:30844980 | 1.40E-58 | dispersed | |
Clacu02g1735 | Clacu-Chr2:30844980 | Clacu07g0338 | Clacu-Chr7:3843198 | 8.00E-71 | dispersed | |
Clacu02g1735 | Clacu-Chr2:30844980 | Clacu02g1737 | Clacu-Chr2:30878767 | 2.90E-20 | proximal | |
Clacu02g1735 | Clacu-Chr2:30844980 | Clacu05g0508 | Clacu-Chr5:4214245 | 1.50E-77 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu02g1735 | - | - | - | 0.0 |