Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g1737 ATGGAACCCAATGAAAACCAGCTCAGCTCCTACTTCCACCACCATCAACACCACCATCAGAGTCCCACCACATCGCCGACCAATGGCCTTTTACCACCCACCCACCACCTCTCCTCCGCCGCCGCCGCCTCCGACGCCGGCCCTCATGTCGTATACCCTCACTCTGTCCCTTCCGCCGCCGTGTCCTCGTCTCCTCTCGAGCCCGCACGCCGGAAGAGAGGCCGGCCGAGGAAGTACGGCACGCCGGAAGAAGCTTTAGCGGCTAAAAAAGCTGCTACGGCGTCGTCTCACTCTTCGTCCTCTAAGGCTAAGAAGGAACTCGCTTCTTCTTCTTCCCTTAATGCCGTTTCCGCTTCTTCTTCCTTCTCCGCGCCTTCCAAAAAATCTCAGTTGGCTGCACTTGGTAATGCAGGCCAAGGTTTTGCGCCACATGTTATTAATGTGGCAGCTGGTGAGGATGTGGGCCAGAAAATTATGATGTTTATGCAACAATGTAAGCGGGAAATTTGTATCCTTTCTGCATCTGGTTCAATCTCCAATGCATCTCTCCGTCAGCCAGCCGCATCCGGAGGCAATATTGCATATGAGGGTCGTTTTGAGATTGTTTCGTTATGCGGATCTTATGTACGAACTGACCTTGGAGGAAAGACGGGTGGTCTTAGTGTATGTCTATCAAGTGCTGAAGGCCACATCATAGGAGGGGGAGTTGGTGGACCGTTGAAGGCTGCTGGACCCGTGCAGGTTATTGTTGGAACCTTCGTAATCGACCCCAAGAAGGAAGTTGGTGGTGGTAAAGGCGATGCATCTGCTGGCAAGTTGTCCTCACCTATTGGTGGGACATCGATGTCAAATCTACGCTATGGCTCCAACATTGACTCGGGAGGTAATCATGTAAGGGGAAATGATGAACACCAAGGTCTTGGAGAGGGTCATTTTTTGCTTCAGCCCCGGGGAGTGAATCTGACATCACCGCGATCAACGGATTGGAGAACGGGTCTGGATGCCACAAACACTGCTTATGATTTGACAGGAAGAACAGGCCATCATTCTCCCGAAAACGGAGATTACGATCAGATTCCCGATTGA 1086 52.03 MEPNENQLSSYFHHHQHHHQSPTTSPTNGLLPPTHHLSSAAAASDAGPHVVYPHSVPSAAVSSSPLEPARRKRGRPRKYGTPEEALAAKKAATASSHSSSSKAKKELASSSSLNAVSASSSFSAPSKKSQLAALGNAGQGFAPHVINVAAGEDVGQKIMMFMQQCKREICILSASGSISNASLRQPAASGGNIAYEGRFEIVSLCGSYVRTDLGGKTGGLSVCLSSAEGHIIGGGVGGPLKAAGPVQVIVGTFVIDPKKEVGGGKGDASAGKLSSPIGGTSMSNLRYGSNIDSGGNHVRGNDEHQGLGEGHFLLQPRGVNLTSPRSTDWRTGLDATNTAYDLTGRTGHHSPENGDYDQIPD 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 30878767 30884742 - ClG42_02g0173700.10 Clacu02g1737 243805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g1737 361 MobiDBLite consensus disorder prediction 319 333 - -
Clacu02g1737 361 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 253 IPR005175 -
Clacu02g1737 361 Gene3D - 143 262 - -
Clacu02g1737 361 ProSiteProfiles PPC domain profile profile. 137 278 IPR005175 -
Clacu02g1737 361 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 36 268 IPR039605 GO:0003680(InterPro)
Clacu02g1737 361 CDD DUF296 143 253 IPR005175 -
Clacu02g1737 361 MobiDBLite consensus disorder prediction 314 333 - -
Clacu02g1737 361 MobiDBLite consensus disorder prediction 339 361 - -
Clacu02g1737 361 MobiDBLite consensus disorder prediction 1 105 - -
Clacu02g1737 361 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 254 - -
Clacu02g1737 361 MobiDBLite consensus disorder prediction 288 309 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g1737 Clacu-Chr2:30878767 Clacu08g1080 Clacu-Chr8:20814560 9.00E-40 dispersed
Clacu02g1735 Clacu-Chr2:30844980 Clacu02g1737 Clacu-Chr2:30878767 2.90E-20 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g1737 - - - 0.0