Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu02g1804 | ATGTTCTTTCTTGATTCTGGAAGATTGGACTTTAGAAATTCGTTCCAGTGTTTTTTCTCAACGTCTGCGGTTTGTGGTTCAAAATCCCGTGTTTTGAAAGTCTTCTCTGAATTGGTTGGGTATATAGGAAGGTTTGGTTTCTGGGCTGCAAAAATGGGTTGTCAGTGTTCCAAGCCTTCTATTGATGAAGATGGCAAAAACAGAGCCTCTGAGAAATTTCCTTCACGAAAGGGTTCACGAGATAATTTATTAAAAAAAGGAGAGGATATGCGATTGAATTCTGTGAAAAGAGACGAAGATGTTCGAATAAATTCCTCACAGAGAGCAGATAGTATTCGATCAAAGGTGAAAACGGATGGTGTTGACATGAAACTTGCTTATTTGGACAAGAGAGTCAACGGCTCTAACAGGGTACACGATGATCAAATTGAAAAAAAGAAGAGGGAGAGGTTGGGAGCTGCCATTTCTGCTAATTATCCTGGAAAAGGAAGCATTCCAAAGGCTATGGAAGCGGAGCAAGTTGCAGCTGGTTGGCCAAGCTGGCTCTCCTCTGTGGCCGGTGAAGCGCTCGAGGGATGGCTGCCACGGAGAGCCGAAACTTTTGAGAAACTTGACAAGATAGGACAAGGCACATATAGTAGTGTTTACAAGGCTCGTGATATCATTCAAAATAAACTAGTCGCTCTAAAACGAGTTCGATTCGATAATCTCGATGTGGAGAGTGTCAAGTTTATGGCCCGGGAAATCCTTATCCTGCGTAGGCTTGATCATCCAAATGTTATAAAATTGGAAGGCTTGATTACATCACCGCGATCATGTAGCTTGTACCTCATTTTTGAGTATATGGAGCATGACCTTACAGGCCTTGCATCTCGGCCTGGGGTCAAGTTCAGCGAACCACAGGTTAAATGCTATATGCAACAACTTCTAAGGGGGCTTGATTATTGCCACAGTCGTGGTGTCCTCCACCGCGATATAAAGGGTTCAAATCTCCTAATTGACGACAATGGCATCTTGAAGATTGCAGATTTTGGATTAGCAAGCCCTTTTGACCCCCATAATCAAGTTCCCTTAACAAGCCGTGTAGTGACTCTATGGTACCGACCACCTGAACTTCTGCTTGGAGCTTCTTATTATGGGGTTGCAGTGGACCTGTGGAGTACGGGTTGCATACTAGCGGAGCTATATTCTGGGAAGCCTATCTTACCTGGAAAAACTGAGGTCGAACAGTTGCACAAGATATTTAAACTTTGTGGGTCGCCGCCTGAGAATTATTGGAAGAAATTGCAATTACCTCATTCAACTGGATTTAAGACGGCTCAGCCATACCGACGTTGTATCGGGGGAATGCTCAAGGATTTCCCACCATCTGCGGTGGCTCTTGTGGATAAGTTGCTTTCTATAGATCCTGCTCATCGAGGAACAGCAGCTGCTGCTCTAAAGAGCGAGTTTTTTACGACTAAACCTCTTGCTTGCGAGCCTACGAGTCTGCCCAAATATCCTCCCAGCAAAGAGATTGATGCAAAATTCCCTGGCTGCAGAAGGCAGTCAAGAGCTGAGGGCAAAGACCCTAAAGATTATGTGGAAGGGAGGCGACCTAAAGAAGCTCACATTAATCTTTCTCTGAATGCTAAGGATGAAGTAAACATGTCAATGCAGAAAAGGCAAGGTTATTCAAGTTTTAAGGGCCGGGGCGGAGTGTTGAATCCGCATGGGGATGAGACAGTTTCTGGGTTTTTGATTCCTCCGCCCAAACAAAATCAATCTGTCACAGAAATTTGCTCAGATACAGGCCGGATTTCGCATTCAGGACCGCTAATTAGCAAACCAGATTGGATGAAATCTAGGAAGCAACTCGATGACCATTCGATGGCGCTTGATGGATCCAATCTCTCAGTATTATCCCGTTTAGTAGCAACGAGGTCTAATATATCTGATCATCCCTATGATAGACCGGGTCCATCACAATCAGAAGTAGGCAGATTGCCTGACTTCGTCAGGGATTCAGAGTCAACGAGAAAGCAGGACCGAATATTTTATACACACCGAGTTGCGGATTCATATCGAATAGAGAACGAAAAAGTTTGTGCTAAAGAACAGTCCCTGCTTGCTTATGGGACAGACATGAACAAGCTTTATACTTCTGGTCCAATCCTTGGTCCATCAAACAACTTAGATAAAATTCTGAAAGAGCGAGACCGTCAGATTCAAGAATACGCTCGACAAGCACGACACGGTAAAGCTGCTAACAGTCAGTTAAAGAATTCAAGAGCAACAACTGGAAAACATCTGATGTCGAGCCATGGAATGTGA | 2313 | 44.19 | MFFLDSGRLDFRNSFQCFFSTSAVCGSKSRVLKVFSELVGYIGRFGFWAAKMGCQCSKPSIDEDGKNRASEKFPSRKGSRDNLLKKGEDMRLNSVKRDEDVRINSSQRADSIRSKVKTDGVDMKLAYLDKRVNGSNRVHDDQIEKKKRERLGAAISANYPGKGSIPKAMEAEQVAAGWPSWLSSVAGEALEGWLPRRAETFEKLDKIGQGTYSSVYKARDIIQNKLVALKRVRFDNLDVESVKFMAREILILRRLDHPNVIKLEGLITSPRSCSLYLIFEYMEHDLTGLASRPGVKFSEPQVKCYMQQLLRGLDYCHSRGVLHRDIKGSNLLIDDNGILKIADFGLASPFDPHNQVPLTSRVVTLWYRPPELLLGASYYGVAVDLWSTGCILAELYSGKPILPGKTEVEQLHKIFKLCGSPPENYWKKLQLPHSTGFKTAQPYRRCIGGMLKDFPPSAVALVDKLLSIDPAHRGTAAAALKSEFFTTKPLACEPTSLPKYPPSKEIDAKFPGCRRQSRAEGKDPKDYVEGRRPKEAHINLSLNAKDEVNMSMQKRQGYSSFKGRGGVLNPHGDETVSGFLIPPPKQNQSVTEICSDTGRISHSGPLISKPDWMKSRKQLDDHSMALDGSNLSVLSRLVATRSNISDHPYDRPGPSQSEVGRLPDFVRDSESTRKQDRIFYTHRVADSYRIENEKVCAKEQSLLAYGTDMNKLYTSGPILGPSNNLDKILKERDRQIQEYARQARHGKAANSQLKNSRATTGKHLMSSHGM | 770 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 31562719 | 31566409 | + | ClG42_02g0180400.10 | Clacu02g1804 | 243872 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu02g1804 | 770 | MobiDBLite | consensus disorder prediction | 60 | 82 | - | - | |
Clacu02g1804 | 770 | Gene3D | Transferase(Phosphotransferase) domain 1 | 284 | 523 | - | - | |
Clacu02g1804 | 770 | FunFam | probable serine/threonine-protein kinase At1g54610 | 188 | 283 | - | - | |
Clacu02g1804 | 770 | FunFam | probable serine/threonine-protein kinase At1g54610 | 284 | 523 | - | - | |
Clacu02g1804 | 770 | MobiDBLite | consensus disorder prediction | 61 | 82 | - | - | |
Clacu02g1804 | 770 | PANTHER | CELL DIVISION PROTEIN KINASE | 200 | 485 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Clacu02g1804 | 770 | MobiDBLite | consensus disorder prediction | 503 | 530 | - | - | |
Clacu02g1804 | 770 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 321 | 333 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Clacu02g1804 | 770 | Pfam | Protein kinase domain | 201 | 485 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Clacu02g1804 | 770 | SUPERFAMILY | Protein kinase-like (PK-like) | 196 | 490 | IPR011009 | - | |
Clacu02g1804 | 770 | CDD | STKc_CDK9_like | 201 | 485 | - | - | |
Clacu02g1804 | 770 | MobiDBLite | consensus disorder prediction | 744 | 770 | - | - | |
Clacu02g1804 | 770 | ProSiteProfiles | Protein kinase domain profile. | 201 | 485 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Clacu02g1804 | 770 | Gene3D | Phosphorylase Kinase; domain 1 | 188 | 283 | - | - | |
Clacu02g1804 | 770 | ProSitePatterns | Protein kinases ATP-binding region signature. | 207 | 230 | IPR017441 | GO:0005524(InterPro) | |
Clacu02g1804 | 770 | MobiDBLite | consensus disorder prediction | 748 | 770 | - | - | |
Clacu02g1804 | 770 | MobiDBLite | consensus disorder prediction | 508 | 530 | - | - | |
Clacu02g1804 | 770 | SMART | serkin_6 | 201 | 485 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Clacu02g1804 | 770 | MobiDBLite | consensus disorder prediction | 644 | 672 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu02g1804 | Clacu-Chr2:31562719 | Clacu05g1093 | Clacu-Chr5:9786229 | 2.10E-211 | dispersed | |
Clacu02g1803 | Clacu-Chr2:31554403 | Clacu02g1804 | Clacu-Chr2:31562719 | 9.60E-167 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73351 | PF00069 | Pkinase | 1.90E-67 | CL0016 | Clacu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu02g1804 | - | - | - | 0.0 |