Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g1878 ATGGATGCTAATGTACGAGCTCGTTTCACACTCGGCAAACAGTCTTCGCTTAAGCCAGAACGTGAAGGTTCGCCTGTGGTTACCGACGAGCTTGATGATTCGATCGCGATTGATCCTGGGATTAAGCTTATGTACTTGGCCAATGATGGTGACTTGGATGGGATTAGGGAGCTACTGGATTCGGGTACCGACGTGAATTTTCACGACACTGATGGCCGAACCTCTTTGCATGTTGCTGCTTGTCAGGGCCGGCCGGATGTCGTTGAGTTACTACTCGAAAGGGGTGCGGACGTCGACGTTCAGGACCAATGGGGCAGCACGGCTCTTGCAGATGCCATATATTACAAGAATCATGATGTGATCAAACTCTTAGAGAAACAAGGTGCAAAGCTACCGATGGCTCCAATGCTCGTACAAAATGCTCGTGAAGTTCCGGAATACGAGATCAATCCAAATGAGCTTGATTTTTCTAAGAGTGTGAACATTACAAAAGGAACTTTCCGCAGTGCTTCATGGCGTGGAATTCAAGTTGCTGTGAAGACACTAGGCGAGGAAGTTTTCACCGACGAGGATAAAGTGAAGGCATTTAGGGATGAACTTGCTTTACTTCAGAAGATACGGCATCCGAATGTTGTCCAATTTCTGGGAGCTGTAACACAAAGTAGTCCAATGATGATTGTCACAGAGTATTTGCCCCAGGGGGACCTTCATGCATTCTTGAAACGTAAAGGTTCCTTGAAGCTAGCAACAGTCGTAAAGTTTGCTCTTGACATTGCAAGGGGAATGAATTATTTGCATGAGCATAAACCTGAAGCAATAATCCATCGCGATCTTGAACCTTCAAACATACTGCGGGATGATTCTGGGCACCTGAAAGTCGCAGACTTTGGAGTTAGCAAACTTCTAAAATTTTCGAATAGGGTTAAAGAAGACAGACCTGTGGCTGTGACATGTCAGGACACTTCATGGCGATATGCGGCACCTGAGGTTTATAAAAATGAAGAATATGATACAAAAGTGGATGTATTTTCATTTTCTTTGATCTTGCAAGAGATGATAGAAGGCAATCCACCTTTTCCAACAATGCCAGAAAATGAAGTAGCCAAAGCTTATATAGCTAACGAACGCCCCCCATTTACGGCTCCACCAAAGCATTATGCACTCGGAATACAGGAGCTCATTCAGGAATGTTGGGATGAGAATCCGCATAAAAGACCCACATTTCGGCAATTAATAAGAAGGTTGGAGGATATTAACACTCGACTCATGCAAACGAGAAGCTTAAAGTTGACTTGGCCCAGCCCAATCGCAAACCCTAGGTGGCGCAAAAGGAAATGCTTCATTGATACCGCATATTCGGCGTCGCCATCACTTCCCACCACCTCTTATCCCTCCTCTCCCGCACTCTGTTTCGCTTCTTGTACTACTCTTTTGTGGAGGCTCAAGGGACAGTCTCTTCCTTTGCTCTCCCTTCATCGTCTCCCTGTTTCTTCTTTCCCTGTTACATATGCTTTTTTTCGGCAGTTAATAATCTCTAATTCTTGGACATCGGGAAGTTTGAAGACTTGTCAAGATGGTCAGTATGCTCTTCTCTTGACGATGTTAATTTTGCGATCTGGAAAGTACTTTTTCACTTTAATAATCATCTTTAATCTTTTCTGTGTTCAGGTGAAGTTTACAGCCGAGGAGCTTCGTAGGATTATGGACTTTAAGCATAACATTCGTAATATGTCTGTTATTGCTCACGTCGATCATGGAAAGTCGACACTTACAGACTCTCTTGTGGCTGCTGCGGGTATCATTGCACAAGAAGTTGCCGGTGATGTACGAATGACAGACACTCGCCAAGATGAGGCAGAGCGTGGTATCACCATTAAATCTACTGGAATCTCCCTCTACTATGAGATGTCTGATGAATCCTTGAAAAGTTACAAGGGAGAGAGACAGGGAAATGAATATCTTATCAATCTTATTGATTCACCCGGGCACGTTGACTTCTCATCTGAGGTTACAGCTGCTTTGCGTATTACCGATGGTGCCCTTGTTGTGGTGGATTGTGTCGAAGGTGTTTGTGTCCAAACAGAGACCGTGCTCCGTCAGGCTTTGGGAGAGAGGATTAGACCTGTCTTGACTGTTAACAAGATGGACAGGTGCTTCCTTGAACTCCAAGTGGATGGAGAAGAGGCTTATCAAACATTTCAGAGGGTGATAGAGAATGCCAATGTGATTATGGCCACATACGAGGATCCACTTCTTGGGGATGTTCAAGTGTACCCCGAGAAAGGAACAGTCGCTTTCTCTGCTGGTCTGCACGGTTGGGCGTTTACCCTGACTAACTTTGCGAAGATGTATGCCTCCAAGTTTGGAGTAGACGAGTCAAAGATGATGGAGAGACTTTGGGGTGAGAACTTCTTTGATCCTGCAACCAAGAAGTGGACGAGCAAGAACACTGGCTCTCCAACATGCAAGCGTGGGTTTGTCCAGTTCTGCTACGAACCCATCAAGCAGATCATTGCAACTTGCATGAACGATCAGAAGGACAAGCTATGGCCCATGTTGCAGAAGCTTGGAGTTGTGATGAAGTCTGAAGAGAAGGATCTGATGAGTAAAGCATTGATGAAGAGGGTCATGCAAACATGGCTCCCAGCAAGCAATGCTCTTTTGGAAATGATGATCTTTCATCTTCCATCCCCTGCCACGGCTCAAAAGTACCGTGTTGAGAATTTGTACGAGGGTCCACTAGATGATGCTTATGCGAGTGCCATTAGAAGTTGTGATCCTGAAGGACCTCTTATGCTTTATGTATCGAAGATGATTCCTGCATCAGACAAGGGCAGGTTCTTTGCCTTTGGACGTGTCTTCTCTGGGAAAGTTTCAACTGGTTTGAAAGTTAGAATTATGGGACCAAACTATGTTCCCGGCGAGAAGAAAGATTTGTATGTGAAGAGTGTCCAGAGAACTGTCATTTGGATGGGAAAGAAGCAAGAAACGGTGGAGGATGTGCCGTGTGGTAACACTGTTGCCATGGTTGGATTGGATCAATTCATCACAAAGAATGCTACTCTGACAAACGAGAAGGAAGTTGATGCCCATCCAATTCGAGCCATGAAATTTTCTGTATCGCCTGTGGTGCGTGTGGCTGTTCAGTGCAAGGTGGCATCTGATCTTCCCAAGCTCGTGGAAGGGCTTAAACGTCTGGCGAAGTCAGATCCTATGGTTGTATGTACAATGGAGGAATCTGGTGAGCACATTGTTGCCGGTGCTGGAGAACTGCATCTTGAGATCTGTCTGAAGGATTTGCAAGATGACTTCATGGGTGGAGCTGAGATCATAAAATCTGACCCTGTTGTCTCTTTCCGTGAAACTGTCCTTGAGAGGTCATGCCGCACGGTGATGAGTAAATCCCCCAACAAACACAATCGTCTATACATGGAAGCACGACCGATGGAGGAAGGACTGGCAGAAGCTATTGACGATGGCCGCATCGGACCACGGGATGACCCTAAAGTTAGGTCTAAAATCTTGTCAGAGGAGTTTGGTTGGGACAAAGATCTTGCTAAGAAGATTTGGTGCTTTGGTCCTGAGACTACCGGCCCTAACATGGTGGTTGATATGTGTAAGGGAGTTCAATACCTAAATGAAATCAAGGATTCCGTTGTCGCCGGTTTCCAGTGGGCGTCGAAAGAAGGTGCATTGGCTGAAGAAAACATGAGAGGCATCTGTTTTGAAGTTTGTGATGTGGTGCTTCACGCTGATGCCATCCACAGAGGAGGTGGTCAAGTCATTCCGACCGCTAGGAGGGTAATTTACGCTTCTCAGCTGACCGCCAAACCAAGACTTCTTGAGCCTGTGTACCTAGTGGAGATTCAGGCTCCTGAGCAAGCTCTTGGTGGTATCTACAGTGTTCTTAACCAGAAGCGTGGGCACGTCTTTGAGGAAATGCAGAGGCCCGGTACCCCTCTTTACAACATCAAGGCGTATCTCCCTGTCATTGAGTCTTTCGGGTTCTCGAGCACATTGAGAGCTGCAACTTCCGGGCAGGCGTTCCCACAGTGTGTTTTCGACCATTGGGACATGATGTCGTCGGATCCATTGGAACCTGGTTCCCAGGCTGCACAGTTAGTTGCAGATATCCGCAAGAGGAAGGGATTGAAGGAACAAATGACCCCACTTTCCGAGTTCGAGGACAAGCTGTAG 4197 46.27 MDANVRARFTLGKQSSLKPEREGSPVVTDELDDSIAIDPGIKLMYLANDGDLDGIRELLDSGTDVNFHDTDGRTSLHVAACQGRPDVVELLLERGADVDVQDQWGSTALADAIYYKNHDVIKLLEKQGAKLPMAPMLVQNAREVPEYEINPNELDFSKSVNITKGTFRSASWRGIQVAVKTLGEEVFTDEDKVKAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPQGDLHAFLKRKGSLKLATVVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKFSNRVKEDRPVAVTCQDTSWRYAAPEVYKNEEYDTKVDVFSFSLILQEMIEGNPPFPTMPENEVAKAYIANERPPFTAPPKHYALGIQELIQECWDENPHKRPTFRQLIRRLEDINTRLMQTRSLKLTWPSPIANPRWRKRKCFIDTAYSASPSLPTTSYPSSPALCFASCTTLLWRLKGQSLPLLSLHRLPVSSFPVTYAFFRQLIISNSWTSGSLKTCQDGQYALLLTMLILRSGKYFFTLIIIFNLFCVQVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKSYKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTSKNTGSPTCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLQKLGVVMKSEEKDLMSKALMKRVMQTWLPASNALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYASAIRSCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTMEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPMEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQAAQLVADIRKRKGLKEQMTPLSEFEDKL 1398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32268201 32282685 + ClG42_02g0187800.10 Clacu02g1878 243946

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g1878 1398 SMART EFG_IV_2 1161 1277 IPR005517 GO:0005525(InterPro)
Clacu02g1878 1398 SUPERFAMILY Ankyrin repeat 42 133 IPR036770 -
Clacu02g1878 1398 NCBIfam small GTP-binding protein domain 575 730 IPR005225 GO:0005525(InterPro)
Clacu02g1878 1398 Gene3D - 1125 1277 IPR014721 -
Clacu02g1878 1398 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515(InterPro)
Clacu02g1878 1398 Gene3D Transferase(Phosphotransferase) domain 1 232 436 - -
Clacu02g1878 1398 SUPERFAMILY EF-G C-terminal domain-like 1039 1115 IPR035647 -
Clacu02g1878 1398 Gene3D Translation factors 898 1039 - -
Clacu02g1878 1398 SMART EFG_C_a 1279 1368 IPR000640 -
Clacu02g1878 1398 Pfam Ankyrin repeats (3 copies) 43 130 IPR002110 GO:0005515(InterPro)
Clacu02g1878 1398 ProSiteProfiles Protein kinase domain profile. 121 422 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Clacu02g1878 1398 Gene3D - 558 792 IPR027417 -
Clacu02g1878 1398 Pfam Elongation Factor G, domain III 1042 1104 IPR041095 -
Clacu02g1878 1398 CDD STKc_MAP3K-like 162 415 - -
Clacu02g1878 1398 CDD aeEF2_snRNP_like_IV 1114 1286 - -
Clacu02g1878 1398 Gene3D Phosphorylase Kinase; domain 1 148 231 - -
Clacu02g1878 1398 FunFam Translation elongation factor 2 1124 1277 - -
Clacu02g1878 1398 FunFam Os01g0748600 protein 142 433 - -
Clacu02g1878 1398 Gene3D - 34 142 IPR036770 -
Clacu02g1878 1398 FunFam Translation elongation factor 2 1041 1118 - -
Clacu02g1878 1398 FunFam Translation elongation factor 2 1278 1398 - -
Clacu02g1878 1398 CDD EF2_II 930 1025 - -
Clacu02g1878 1398 CDD eEF2_snRNP_like_C 1282 1360 - -
Clacu02g1878 1398 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 558 1397 - GO:0003746(PANTHER)|GO:0003924(PANTHER)|GO:0005829(PANTHER)|GO:0006414(PANTHER)|GO:0043022(PANTHER)|GO:1990904(PANTHER)
Clacu02g1878 1398 SUPERFAMILY Protein kinase-like (PK-like) 173 451 IPR011009 -
Clacu02g1878 1398 CDD EF2 575 785 - -
Clacu02g1878 1398 FunFam Translation elongation factor 2 898 1039 - -
Clacu02g1878 1398 FunFam serine/threonine-protein kinase STY46-like 149 232 - -
Clacu02g1878 1398 Gene3D - 1278 1398 - -
Clacu02g1878 1398 Pfam Elongation factor G C-terminus 1279 1365 IPR000640 -
Clacu02g1878 1398 Pfam Elongation factor Tu GTP binding domain 573 776 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Clacu02g1878 1398 FunFam Integrin-linked protein kinase family 24 147 - -
Clacu02g1878 1398 FunFam Translation elongation factor 2 558 792 - -
Clacu02g1878 1398 ProSiteProfiles Ankyrin repeat region circular profile. 71 102 - -
Clacu02g1878 1398 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 572 899 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Clacu02g1878 1398 Gene3D Elongation Factor G (Translational Gtpase), domain 3 1041 1118 - -
Clacu02g1878 1398 SMART ANK_2a 71 100 IPR002110 GO:0005515(InterPro)
Clacu02g1878 1398 SMART ANK_2a 104 133 IPR002110 GO:0005515(InterPro)
Clacu02g1878 1398 SMART ANK_2a 39 67 IPR002110 GO:0005515(InterPro)
Clacu02g1878 1398 SUPERFAMILY EF-G C-terminal domain-like 1282 1393 IPR035647 -
Clacu02g1878 1398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 559 896 IPR027417 -
Clacu02g1878 1398 SUPERFAMILY Ribosomal protein S5 domain 2-like 1117 1281 IPR020568 -
Clacu02g1878 1398 CDD EF2_snRNP_III 1042 1114 - -
Clacu02g1878 1398 Pfam Protein tyrosine and serine/threonine kinase 161 415 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Clacu02g1878 1398 Pfam Elongation factor Tu domain 2 949 1017 IPR004161 GO:0005525(InterPro)
Clacu02g1878 1398 Pfam Elongation factor G, domain IV 1165 1277 IPR005517 GO:0005525(InterPro)
Clacu02g1878 1398 PRINTS GTP-binding elongation factor signature 656 666 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Clacu02g1878 1398 PRINTS GTP-binding elongation factor signature 576 589 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Clacu02g1878 1398 PRINTS GTP-binding elongation factor signature 620 628 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Clacu02g1878 1398 PRINTS GTP-binding elongation factor signature 672 683 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Clacu02g1878 1398 PRINTS GTP-binding elongation factor signature 708 717 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Clacu02g1878 1398 SUPERFAMILY Translation proteins 897 1031 IPR009000 -
Clacu02g1878 1398 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 613 628 IPR031157 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g1878 K03234 - - csv:101209544 1650.57
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g1878 Clacu-Chr2:32268201 Clacu05g2600 Clacu-Chr5:33827712 5.50E-69 dispersed
Clacu02g1877 Clacu-Chr2:32257797 Clacu02g1878 Clacu-Chr2:32268201 0.00E+00 tandem
Clacu01g0383 Clacu-Chr1:3865040 Clacu02g1878 Clacu-Chr2:32268201 2.30E-40 transposed
Clacu02g1759 Clacu-Chr2:31147666 Clacu02g1878 Clacu-Chr2:32268201 6.90E-167 transposed
Clacu02g1895 Clacu-Chr2:32446971 Clacu02g1878 Clacu-Chr2:32268201 0.00E+00 transposed
Clacu06g0252 Clacu-Chr6:2997601 Clacu02g1878 Clacu-Chr2:32268201 2.20E-32 transposed
Clacu09g1065 Clacu-Chr9:10117686 Clacu02g1878 Clacu-Chr2:32268201 1.50E-116 transposed
Clacu09g1880 Clacu-Chr9:33646988 Clacu02g1878 Clacu-Chr2:32268201 6.70E-21 transposed
Clacu10g1651 Clacu-Chr10:29915385 Clacu02g1878 Clacu-Chr2:32268201 4.20E-22 transposed
Clacu09g1433 Clacu-Chr9:20259546 Clacu02g1878 Clacu-Chr2:32268201 3.70E-86 transposed
Clacu01g2485 Clacu-Chr1:35250137 Clacu02g1878 Clacu-Chr2:32268201 4.00E-129 wgd
Clacu02g1878 Clacu-Chr2:32268201 Clacu03g0733 Clacu-Chr3:8172960 5.80E-143 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Clacu09g2074 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 95.5 2.2e-253 871.3
Clacu09g2073 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 95.1 8.3e-253 869.4
Clacu02g2154 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 94.9 1.4e-252 868.6
Clacu06g0816 . 22 447 Eukaryotic Initiation Factors Gene Family AT5G60390 96.2 6.6e-242 833.2
Clacu09g2074 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 95.5 2.2e-253 871.3
Clacu09g2073 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 95.1 8.3e-253 869.4
Clacu02g2154 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 94.9 1.4e-252 868.6
Clacu06g0816 . 22 447 Eukaryotic Initiation Factors Gene Family AT1G07920 96.2 6.6e-242 833.2
Clacu02g2154 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.7 1.2e-201 699.1
Clacu09g2074 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.3 2.3e-200 694.9
Clacu09g2073 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 78.8 8.9e-200 693.0
Clacu06g0816 . 22 447 Eukaryotic Initiation Factors Gene Family AT1G07930 79.6 8.3e-190 659.8
Clacu09g2074 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 95.5 2.2e-253 871.3
Clacu09g2073 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 95.1 8.3e-253 869.4
Clacu02g2154 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 94.9 1.4e-252 868.6
Clacu06g0816 . 22 447 Eukaryotic Initiation Factors Gene Family AT1G07940 96.2 6.6e-242 833.2
Clacu07g1655 . 84 802 Eukaryotic Initiation Factors Gene Family AT3G02270 56.3 1.5e-181 633.3
Clacu02g0187 . 30 127 Eukaryotic Initiation Factors Gene Family AT4G27130 91.8 1.1e-47 186.0
Clacu10g0518 . 45 156 Eukaryotic Initiation Factors Gene Family AT4G27130 80.5 5.3e-47 183.7
Clacu09g1080 . 1 112 Eukaryotic Initiation Factors Gene Family AT4G27130 79.6 2.6e-46 181.4
Clacu02g0187 . 30 127 Eukaryotic Initiation Factors Gene Family AT5G54760 90.8 1.8e-47 185.3
Clacu10g0518 . 45 156 Eukaryotic Initiation Factors Gene Family AT5G54760 80.5 5.3e-47 183.7
Clacu09g1080 . 1 112 Eukaryotic Initiation Factors Gene Family AT5G54760 79.6 2.6e-46 181.4
Clacu10g0518 . 45 156 Eukaryotic Initiation Factors Gene Family AT5G54940 86.6 4.9e-53 203.8
Clacu09g1080 . 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 85.7 4.2e-52 200.7
Clacu02g0187 . 28 127 Eukaryotic Initiation Factors Gene Family AT5G54940 73.0 5.0e-37 150.6
Clacu02g0187 . 29 127 Eukaryotic Initiation Factors Gene Family AT1G54290 90.9 3.7e-48 187.6
Clacu10g0518 . 45 156 Eukaryotic Initiation Factors Gene Family AT1G54290 80.5 6.3e-48 186.8
Clacu09g1080 . 1 112 Eukaryotic Initiation Factors Gene Family AT1G54290 77.9 5.9e-46 180.3
Clacu02g0248 . 19 141 Eukaryotic Initiation Factors Gene Family AT5G35680 91.1 5.0e-61 230.7
Clacu07g1577 . 1 88 Eukaryotic Initiation Factors Gene Family AT5G35680 89.8 4.7e-43 171.0
Clacu02g0248 . 19 162 Eukaryotic Initiation Factors Gene Family AT2G04520 89.6 3.3e-65 244.6
Clacu07g1577 . 1 105 Eukaryotic Initiation Factors Gene Family AT2G04520 84.8 8.1e-48 186.8
Clacu09g1557 . 1 225 Eukaryotic Initiation Factors Gene Family AT2G40290 88.9 1.4e-116 416.0
Clacu09g1557 . 1 344 Eukaryotic Initiation Factors Gene Family AT5G05470 81.2 5.9e-158 553.9
Clacu03g0005 . 29 296 Eukaryotic Initiation Factors Gene Family AT5G20920 76.3 1.6e-110 396.0
Clacu03g0005 . 143 283 Eukaryotic Initiation Factors Gene Family AT5G01940 56.3 1.5e-38 156.8
Clacu03g0005 . 147 290 Eukaryotic Initiation Factors Gene Family AT3G07920 70.9 5.3e-56 214.2
Clacu11g0228 . 331 794 Eukaryotic Initiation Factors Gene Family AT1G04170 91.6 4.1e-247 850.5
Clacu11g0228 . 334 794 Eukaryotic Initiation Factors Gene Family AT4G18330 83.1 5.7e-220 760.4
Clacu11g0228 . 423 793 Eukaryotic Initiation Factors Gene Family AT2G18720 75.7 2.3e-163 572.0
Clacu09g0141 . 1 394 Eukaryotic Initiation Factors Gene Family AT1G53880 79.2 2.9e-169 591.7
Clacu09g0141 . 1 326 Eukaryotic Initiation Factors Gene Family AT1G72340 77.4 1.5e-134 476.1
Clacu03g1543 . 56 379 Eukaryotic Initiation Factors Gene Family AT2G05830 74.4 6.3e-133 470.7
Clacu01g0773 . 94 500 Eukaryotic Initiation Factors Gene Family AT3G07300 80.7 4.0e-177 617.8
Clacu06g1612 . 1 651 Eukaryotic Initiation Factors Gene Family AT5G38640 61.1 3.4e-199 691.8
Clacu06g1613 . 1 638 Eukaryotic Initiation Factors Gene Family AT5G38640 59.6 3.6e-193 671.8
Clacu06g1612 . 328 651 Eukaryotic Initiation Factors Gene Family AT2G44070 75.7 9.9e-142 500.0
Clacu06g1613 . 316 638 Eukaryotic Initiation Factors Gene Family AT2G44070 74.5 1.5e-137 486.1
Clacu06g1613 . 1 571 Eukaryotic Initiation Factors Gene Family AT1G48970 56.6 7.5e-167 584.3
Clacu06g1612 . 1 583 Eukaryotic Initiation Factors Gene Family AT1G48970 57.2 3.7e-166 582.0
Clacu07g1655 . 84 807 Eukaryotic Initiation Factors Gene Family AT2G34970 64.6 6.5e-239 823.9
Clacu07g1655 . 84 802 Eukaryotic Initiation Factors Gene Family AT3G02270 56.3 1.5e-181 633.3
Clacu07g1655 . 84 807 Eukaryotic Initiation Factors Gene Family AT4G18300 60.4 4.1e-206 714.9
Clacu04g1318 . 174 1112 Eukaryotic Initiation Factors Gene Family AT1G48410 83.2 0.0e+00 1563.1
Clacu05g0549 . 119 981 Eukaryotic Initiation Factors Gene Family AT1G48410 77.4 0.0e+00 1367.8
Clacu06g1130 . 99 959 Eukaryotic Initiation Factors Gene Family AT1G48410 70.5 0.0e+00 1253.8
Clacu01g1468 . 111 966 Eukaryotic Initiation Factors Gene Family AT1G48410 59.8 2.3e-301 1031.9
Clacu05g0549 . 1 981 Eukaryotic Initiation Factors Gene Family AT5G43810 82.8 0.0e+00 1654.4
Clacu04g1318 . 238 1112 Eukaryotic Initiation Factors Gene Family AT5G43810 76.4 0.0e+00 1378.6
Clacu06g1130 . 102 959 Eukaryotic Initiation Factors Gene Family AT5G43810 74.0 0.0e+00 1327.8
Clacu01g1468 . 97 966 Eukaryotic Initiation Factors Gene Family AT5G43810 56.6 1.8e-292 1002.3
Clacu03g0616 . 42 990 Eukaryotic Initiation Factors Gene Family AT4G11420 70.9 0.0e+00 1135.2
Clacu03g0619 . 24 972 Eukaryotic Initiation Factors Gene Family AT4G11420 69.9 0.0e+00 1113.2
Clacu03g1791 . 1 743 Eukaryotic Initiation Factors Gene Family AT4G11420 70.7 7.5e-238 820.8
Clacu09g1044 . 9 712 Eukaryotic Initiation Factors Gene Family AT5G27640 76.7 0.0e+00 1135.2
Clacu09g1050 . 5 712 Eukaryotic Initiation Factors Gene Family AT5G27640 76.0 0.0e+00 1129.8
Clacu09g1050 . 9 712 Eukaryotic Initiation Factors Gene Family AT5G25780 74.8 0.0e+00 1110.5
Clacu09g1044 . 9 712 Eukaryotic Initiation Factors Gene Family AT5G25780 74.8 0.0e+00 1109.7
Clacu05g1107 . 794 1642 Eukaryotic Initiation Factors Gene Family AT3G56150 73.1 0.0e+00 1142.5
Clacu05g1107 . 793 1623 Eukaryotic Initiation Factors Gene Family AT3G22860 59.3 4.2e-255 877.9
Clacu01g2619 . 5 535 Eukaryotic Initiation Factors Gene Family AT4G20980 81.0 1.8e-255 878.6
Clacu01g2619 . 5 535 Eukaryotic Initiation Factors Gene Family AT5G44320 79.1 1.4e-247 852.4
Clacu04g0400 . 3 437 Eukaryotic Initiation Factors Gene Family AT3G57290 87.1 1.8e-228 788.5
Clacu11g0780 . 2 285 Eukaryotic Initiation Factors Gene Family AT2G39990 76.6 4.2e-128 454.5
Clacu05g1342 . 8 286 Eukaryotic Initiation Factors Gene Family AT3G11400 70.1 2.1e-117 419.1
Clacu04g1326 . 8 288 Eukaryotic Initiation Factors Gene Family AT3G11400 69.6 3.6e-117 418.3
Clacu05g1342 . 9 286 Eukaryotic Initiation Factors Gene Family AT5G06000 68.3 1.9e-107 386.0
Clacu04g1326 . 9 286 Eukaryotic Initiation Factors Gene Family AT5G06000 68.6 4.3e-107 384.8
Clacu07g1587 . 140 382 Eukaryotic Initiation Factors Gene Family AT1G10840 81.1 3.0e-111 398.3
Clacu10g1525 . 1 247 Eukaryotic Initiation Factors Gene Family AT2G46280 66.7 2.5e-92 335.5
Clacu10g1525 . 1 326 Eukaryotic Initiation Factors Gene Family AT2G46290 81.1 3.3e-159 558.1
Clacu03g1522 . 1 232 Eukaryotic Initiation Factors Gene Family AT4G33250 75.9 3.5e-98 354.8
Clacu09g0083 . 102 492 Eukaryotic Initiation Factors Gene Family AT3G13920 93.4 4.0e-209 724.2
Clacu07g1389 . 269 659 Eukaryotic Initiation Factors Gene Family AT3G13920 92.6 4.5e-208 720.7
Clacu10g1188 . 38 388 Eukaryotic Initiation Factors Gene Family AT3G13920 68.1 1.3e-135 479.9
Clacu07g1389 . 269 681 Eukaryotic Initiation Factors Gene Family AT1G72730 89.4 2.2e-215 745.0
Clacu09g0083 . 102 514 Eukaryotic Initiation Factors Gene Family AT1G72730 89.1 4.9e-215 743.8
Clacu10g1188 . 38 410 Eukaryotic Initiation Factors Gene Family AT1G72730 65.4 1.8e-140 496.1
Clacu10g1188 . 22 410 Eukaryotic Initiation Factors Gene Family AT3G19760 89.2 2.3e-201 698.4
Clacu09g0083 . 138 514 Eukaryotic Initiation Factors Gene Family AT3G19760 64.2 1.1e-139 493.4
Clacu07g1389 . 305 681 Eukaryotic Initiation Factors Gene Family AT3G19760 63.7 1.2e-138 490.0
Clacu08g1486 . 1 427 Eukaryotic Initiation Factors Gene Family AT5G11200 85.5 7.7e-225 776.5
Clacu08g1486 . 84 427 Eukaryotic Initiation Factors Gene Family AT5G11170 94.5 4.2e-188 654.1
Clacu08g1919 . 1 531 Eukaryotic Initiation Factors Gene Family AT1G13020 51.7 5.4e-113 405.2
Clacu02g1196 . 2 394 Eukaryotic Initiation Factors Gene Family AT4G38710 56.7 9.7e-79 291.2
Clacu03g0725 . 1 234 Eukaryotic Initiation Factors Gene Family AT4G18040 68.1 1.7e-92 335.9
Clacu06g0734 . 26 202 Eukaryotic Initiation Factors Gene Family AT4G18040 53.9 3.1e-57 218.8
Clacu03g0725 . 48 234 Eukaryotic Initiation Factors Gene Family AT1G29590 63.6 4.9e-74 274.6
Clacu06g0734 . 25 203 Eukaryotic Initiation Factors Gene Family AT1G29590 52.2 5.1e-55 211.5
Clacu03g0725 . 48 234 Eukaryotic Initiation Factors Gene Family AT1G29550 63.1 1.8e-73 272.7
Clacu06g0734 . 25 203 Eukaryotic Initiation Factors Gene Family AT1G29550 51.7 1.9e-54 209.5
Clacu06g0734 . 14 195 Eukaryotic Initiation Factors Gene Family AT5G35620 68.3 1.9e-71 265.8
Clacu03g0725 . 58 224 Eukaryotic Initiation Factors Gene Family AT5G35620 55.8 1.6e-51 199.5
Clacu10g1337 . 48 238 Eukaryotic Initiation Factors Gene Family AT5G18110 85.3 2.2e-97 352.1
Clacu05g0335 . 503 1428 Eukaryotic Initiation Factors Gene Family AT3G60240 50.1 3.6e-227 786.2
Clacu06g1345 . 1 810 Eukaryotic Initiation Factors Gene Family AT5G57870 62.3 1.6e-267 919.1
Clacu05g1774 . 2 768 Eukaryotic Initiation Factors Gene Family AT5G57870 58.4 2.5e-244 842.0
Clacu06g1345 . 2 810 Eukaryotic Initiation Factors Gene Family AT2G24050 54.8 2.2e-226 782.3
Clacu05g1774 . 2 769 Eukaryotic Initiation Factors Gene Family AT2G24050 56.6 3.0e-223 771.9
Clacu06g1345 . 252 442 Eukaryotic Initiation Factors Gene Family AT1G62410 52.4 5.6e-48 188.0
Clacu05g1774 . 523 769 Eukaryotic Initiation Factors Gene Family AT4G30680 50.2 2.9e-56 215.7
Clacu08g1244 . 1 445 Eukaryotic Initiation Factors Gene Family AT1G77840 63.2 8.7e-138 487.3
Clacu08g1244 . 1 445 Eukaryotic Initiation Factors Gene Family AT1G36730 68.5 7.9e-123 437.6
Clacu05g1783 . 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 84.3 9.7e-59 223.0
Clacu05g2592 . 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 81.9 2.4e-57 218.4
Clacu06g1332 . 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 81.9 4.1e-57 217.6
Clacu08g1530 . 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 81.1 4.5e-56 214.2
Clacu05g1783 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 86.8 3.1e-77 284.6
Clacu08g1530 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 86.8 1.2e-76 282.7
Clacu05g2592 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 83.6 4.5e-76 280.8
Clacu06g1332 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 84.3 2.9e-75 278.1
Clacu05g1783 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 91.2 9.6e-79 289.7
Clacu06g1332 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 87.4 2.6e-76 281.6
Clacu08g1530 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 89.3 2.6e-76 281.6
Clacu05g2592 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 86.2 1.0e-75 279.6
Clacu09g0963 . 338 1359 Eukaryotic Initiation Factors Gene Family AT1G76810 69.3 0.0e+00 1178.7
Clacu09g0963 . 470 1359 Eukaryotic Initiation Factors Gene Family AT1G21160 60.7 2.2e-275 945.7
Clacu02g0028 . 1 245 Eukaryotic Initiation Factors Gene Family AT3G55620 87.8 6.2e-125 443.7
Clacu06g1285 . 1 245 Eukaryotic Initiation Factors Gene Family AT3G55620 87.3 5.2e-124 440.7
Clacu02g0028 . 1 245 Eukaryotic Initiation Factors Gene Family AT2G39820 68.4 8.8e-95 343.6
Clacu06g1285 . 1 245 Eukaryotic Initiation Factors Gene Family AT2G39820 67.6 7.4e-94 340.5
Clacu05g1176 . 133 769 Eukaryotic Initiation Factors Gene Family AT2G23350 60.1 4.3e-205 711.4
Clacu02g0646 . 5 647 Eukaryotic Initiation Factors Gene Family AT2G23350 58.4 7.6e-202 700.7
Clacu08g0866 . 36 635 Eukaryotic Initiation Factors Gene Family AT2G23350 50.3 1.0e-150 530.8
Clacu05g1176 . 136 766 Eukaryotic Initiation Factors Gene Family AT4G34110 72.3 5.6e-255 877.1
Clacu02g0646 . 1 644 Eukaryotic Initiation Factors Gene Family AT4G34110 70.2 7.1e-250 860.1
Clacu08g0866 . 21 653 Eukaryotic Initiation Factors Gene Family AT4G34110 55.0 4.5e-172 601.7
Clacu08g0866 . 1 635 Eukaryotic Initiation Factors Gene Family AT1G22760 58.2 4.4e-194 674.9
Clacu05g1176 . 147 743 Eukaryotic Initiation Factors Gene Family AT1G22760 55.1 4.6e-167 585.1
Clacu02g0646 . 22 633 Eukaryotic Initiation Factors Gene Family AT1G22760 53.9 5.6e-165 578.2
Clacu08g0866 . 34 653 Eukaryotic Initiation Factors Gene Family AT1G71770 57.8 1.8e-190 662.9
Clacu05g1176 . 147 746 Eukaryotic Initiation Factors Gene Family AT1G71770 54.6 1.6e-167 586.6
Clacu02g0646 . 22 625 Eukaryotic Initiation Factors Gene Family AT1G71770 54.8 4.8e-167 585.1
Clacu05g1176 . 146 770 Eukaryotic Initiation Factors Gene Family AT1G49760 73.9 2.6e-258 888.3
Clacu02g0646 . 25 647 Eukaryotic Initiation Factors Gene Family AT1G49760 72.4 5.2e-251 864.0
Clacu08g0866 . 34 652 Eukaryotic Initiation Factors Gene Family AT1G49760 52.6 1.1e-163 573.9
Clacu09g2074 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 95.5 2.2e-253 871.3
Clacu09g2073 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 95.1 8.3e-253 869.4
Clacu02g2154 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 94.9 1.4e-252 868.6
Clacu06g0816 . 22 447 Eukaryotic Initiation Factors Gene Family AT1G07920 96.2 6.6e-242 833.2
Clacu02g2154 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.7 1.2e-201 699.1
Clacu09g2074 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.3 2.3e-200 694.9
Clacu09g2073 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 78.8 8.9e-200 693.0
Clacu06g0816 . 22 447 Eukaryotic Initiation Factors Gene Family AT1G07930 79.6 8.3e-190 659.8
Clacu09g2074 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 95.5 2.2e-253 871.3
Clacu09g2073 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 95.1 8.3e-253 869.4
Clacu02g2154 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 94.9 1.4e-252 868.6
Clacu06g0816 . 22 447 Eukaryotic Initiation Factors Gene Family AT1G07940 96.2 6.6e-242 833.2
Clacu09g2074 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 95.5 2.2e-253 871.3
Clacu09g2073 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 95.1 8.3e-253 869.4
Clacu02g2154 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 94.9 1.4e-252 868.6
Clacu06g0816 . 22 447 Eukaryotic Initiation Factors Gene Family AT5G60390 96.2 6.6e-242 833.2
Clacu03g0367 . 1251 1447 Eukaryotic Initiation Factors Gene Family AT5G12110 51.0 2.6e-37 152.5
Clacu03g0367 . 1251 1445 Eukaryotic Initiation Factors Gene Family AT5G19510 61.0 1.3e-41 166.8
Clacu11g0704 . 836 1026 Eukaryotic Initiation Factors Gene Family AT1G30230 76.6 9.3e-55 210.7
Clacu03g0367 . 1257 1445 Eukaryotic Initiation Factors Gene Family AT1G30230 74.0 2.3e-53 206.1
Clacu11g0704 . 836 1026 Eukaryotic Initiation Factors Gene Family AT2G18110 78.1 1.2e-56 216.9
Clacu03g0367 . 1254 1445 Eukaryotic Initiation Factors Gene Family AT2G18110 74.9 1.3e-55 213.4
Clacu11g0204 . 49 470 Eukaryotic Initiation Factors Gene Family AT1G57720 75.1 1.1e-171 599.7
Clacu10g0700 . 1 412 Eukaryotic Initiation Factors Gene Family AT1G57720 77.7 2.6e-168 588.6
Clacu02g1877 . 77 918 Eukaryotic Initiation Factors Gene Family AT1G56070 93.9 0.0e+00 1603.2
Clacu02g1878 . 557 1398 Eukaryotic Initiation Factors Gene Family AT1G56070 93.9 0.0e+00 1603.2
Clacu02g1895 . 1 843 Eukaryotic Initiation Factors Gene Family AT1G56070 93.2 0.0e+00 1593.2
Clacu09g1065 . 1 1037 Eukaryotic Initiation Factors Gene Family AT3G22980 71.8 0.0e+00 1459.1
Clacu06g0160 . 421 854 Eukaryotic Initiation Factors Gene Family AT5G47880 88.0 2.1e-221 765.0
Clacu06g0160 . 424 856 Eukaryotic Initiation Factors Gene Family AT1G12920 89.1 9.9e-227 782.7
Clacu06g0160 . 421 856 Eukaryotic Initiation Factors Gene Family AT3G26618 90.6 1.6e-229 792.0
Clacu05g1904 . 54 787 Eukaryotic Initiation Factors Gene Family AT5G10630 54.1 1.6e-204 709.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001065 2 2 2 3 2 3 0 3 2 3 3 3 3 4 3 2 3 3 3 2 3 3 3 2 3 3 3 4 5 1 81
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73354 PF00009 GTP_EFTU 6.30E-66 CL0023 Clacu PK