Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g1905 ATGCCTATGGCTACTGCACCCTTGAACAAAATTGAGCGAGCCCATCAGATGTACCGTGAAGGGCTTTATGTCGAAGCCCTGAGATTTTACACTGAAGCTCTTGCCATGGCCAAAACCAAGTCCCAGAGGATTGCGCTTCATAGTAACAGAGCTGCTTGCCATTTGAAACTTCATGATTTCAAGAAGGCAGCGGAAGAATGTACATGGGTTCTTGAACTTGATCACAAGCACACTGGAGCTCTAATGCTTCGTGCCCAGACTCTTGTCACACTCAAGGAATACCATTCTGCTCTCTTTGATGTTAACAGACTTATAGAATTGAACCCATCATCAGAAGTTTATCAGAATCTTCACACTCGACTCAAGACGCAATTGTCGCTTGCTCCAATACCTGAATCAGAAGTAGAGCTTGAAGAAGAGGAGGAAGAAGAAGAATGCGCTGTCGAGTTCAGTGCATATGCTGCCAATGAGAAGTGCAATGAGGGAAAAGAAAATGTTGTCGCTTCGAGTATTGCACAGGTACAGAAACCTGAGCATAATTGCAATTTGATTGAAAAGAACATTATCCAGACTACTCAGGGCAACTGTGGATTATCTGAAGAAGAAAGGGGCAATCAGAAAGTTGAGGTGAAAATGAATACTAAAAGTGAAGTTGTTGCTCCTCAAGCACAAAGCAAGAAGGGCACAACTGACCTAGGTCCCAATGGCTGGCAAACAATCCCAAAACCAAAAGGTCACTCAGCTTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCTAGTGAAGATGATGATGACGATGAAGAAGAAGACTCAGGACCTCAATTCCGTTTTCGTGTTAGAACTAAAAATGACACAACGAGCAACTCCGAGCCTCGTGTATTTTGGAAATTCATATGTAAAAAATCAGTACTGTTGAGACCGTCAGACCTATGTAAAGTGTATTTGGTTACATTCAAAACTAGCACTGTGGATCTGATCGACGAGCAAGCTTTGCACATAAGATTTTATACAGAGCTCCAGCTGGTACTGTTTGGTTTGAGTAATCTGTCTGCTGCACAATATCAATTTCCGGGTGGTTATCACAAATGGAGATCCTGTCTTGGATTATGGATAATAGTTCTGTCCAGCAATTGCTCGACTCTTCGCAATTTTCCCACAATTCTTTCTCTGCTCTTTAGCCGCTTTATAAAAGGATATGCATATGGAGAATTTATCATCTAG 1227 42.14 MPMATAPLNKIERAHQMYREGLYVEALRFYTEALAMAKTKSQRIALHSNRAACHLKLHDFKKAAEECTWVLELDHKHTGALMLRAQTLVTLKEYHSALFDVNRLIELNPSSEVYQNLHTRLKTQLSLAPIPESEVELEEEEEEEECAVEFSAYAANEKCNEGKENVVASSIAQVQKPEHNCNLIEKNIIQTTQGNCGLSEEERGNQKVEVKMNTKSEVVAPQAQSKKGTTDLGPNGWQTIPKPKGHSALDYARWDRVEDDSSEDDDDDEEEDSGPQFRFRVRTKNDTTSNSEPRVFWKFICKKSVLLRPSDLCKVYLVTFKTSTVDLIDEQALHIRFYTELQLVLFGLSNLSAAQYQFPGGYHKWRSCLGLWIIVLSSNCSTLRNFPTILSLLFSRFIKGYAYGEFII 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32578456 32584806 - ClG42_02g0190500.10 Clacu02g1905 243973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g1905 408 Gene3D Tetratricopeptide repeat domain 9 151 IPR011990 GO:0005515(InterPro)
Clacu02g1905 408 SMART tpr_5 44 77 IPR019734 GO:0005515(InterPro)
Clacu02g1905 408 SMART tpr_5 78 111 IPR019734 GO:0005515(InterPro)
Clacu02g1905 408 SMART tpr_5 7 40 IPR019734 GO:0005515(InterPro)
Clacu02g1905 408 SUPERFAMILY TPR-like 11 120 IPR011990 GO:0005515(InterPro)
Clacu02g1905 408 MobiDBLite consensus disorder prediction 217 236 - -
Clacu02g1905 408 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 3 283 - -
Clacu02g1905 408 MobiDBLite consensus disorder prediction 214 290 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g1905 - - - 0.0