Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g1995 ATGGCCGCCTGTCCCACCGACTTCACTCGCGACTCCGCCTGTCGCGACGGACTCGCCGCCGCCCACCTCAAACTCATCTCCATCTTCCTCATCTTCATCACCAGCGTCATCGGCGTCTCCTCGCCGGTCCTCCTCACTCGCTTCTTCCACGGCAAACCTGTCTACGACAAAGCCATTCTCATCATCAAATGCTTCGCCGCCGGCGTTATTCTCTCCACCTCCCTCGTCCACGTCCTCCCCGACGCCTTCGACGCCCTCTCCGACTGCCGCGTCGCCTCCCACCATCCCTGGCGGGACTTTCCCTTTTCCGGCCTCATCACCATGGTCGGCGCTCTCGTCGCCCTCCTCGTGGACGTCACAGCCACGTCACACGTCGAACACGGGCAGTATAATCCGGTGGAGGATTCCGGCGGGGAAATTGGGCTTCTGGTGGCGGGGGATTTGAAATCGGAGATGGTGGGAGGCGAGGGAGGAAGGGAAGAGGAATTAGTGAAGATGAAACAGAAATTAGTATCGAAAGTACTGGAAATTGGGATAATATTTCATTCGGTCATAATTGGAGTAACCATGGGAATGTCTCAGAATCAGTGTACGATTAGGCCGCTTGTTGCTGCTCTTGCTTTTCATCAAATCTTCGAAGGAATGGGTCTTGGCGGATGTATTGCTCAGGCAGGATTTAGCTTCACAACGACGTCGTATATGTGTTTTATGTTCTCAGTGACAACGCCGATGGGTATAGTATTAGGGATGGTACTATTTTCAATAACAGGTTATGACGATAACAATCCCAAAGCTTTGATAATGGAAGGTTTATTGGGTTCATTTTCATCTGGGATTCTCATATACATGGCTTTAGTAGATTTAATAGCCGTTGATTTTTTTCACAACAAGATGATGAGCTCAAATCAATGGCTGAAAAAGACTTGTTTTATTGCCTTGTTGCTTGGCTCTGCTTCCATGTCTGTTTTGGCTTTGTGGGCTTGA 984 50.3 MAACPTDFTRDSACRDGLAAAHLKLISIFLIFITSVIGVSSPVLLTRFFHGKPVYDKAILIIKCFAAGVILSTSLVHVLPDAFDALSDCRVASHHPWRDFPFSGLITMVGALVALLVDVTATSHVEHGQYNPVEDSGGEIGLLVAGDLKSEMVGGEGGREEELVKMKQKLVSKVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLGGCIAQAGFSFTTTSYMCFMFSVTTPMGIVLGMVLFSITGYDDNNPKALIMEGLLGSFSSGILIYMALVDLIAVDFFHNKMMSSNQWLKKTCFIALLLGSASMSVLALWA 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33409658 33410916 + ClG42_02g0199500.10 Clacu02g1995 244063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g1995 327 Pfam ZIP Zinc transporter 22 324 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Clacu02g1995 327 NCBIfam ZIP zinc/iron transport family 11 327 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Clacu02g1995 327 PANTHER ZINC/IRON TRANSPORTER 20 326 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g1995 Clacu-Chr2:33409658 Clacu11g1868 Clacu-Chr11:29811139 2.90E-61 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g1995 K14709 - csv:101214729 562.762