Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu02g2019 | ATGGCGCCAATTCCCAGATCTCTCTCCCACAAATTCTTCTTCCTTTTACTCCTCATTCTCCACGTCGGCTGCTTCCTTCTTACCACCGCCGACCACCGTCGCCGCCGCCACCACCGTCCTACTCCCTCCTGTTTGAAGCCACACAAACTCAAATCCCTAGCTTCCTCTTTTTCATTTCTCAAACGAATCTTCTCTTCCAAGACTTGCAAAATGGCAATCGAAACCGCTCGCTCGCCTTCCACTCCCGCTAGGTCATCGCAGCACTCCATCGTCACGCTCATCCAACAGGAGATTCCTCCTCCGCCGATTCCGGAGACTCATCCTCCAACCGGAACGCCGCAGGATTCAGATATCACTACGGCAGAGCCGAATCAATCTTTTCCTCTTCGAAACGATATCTTCCCCTGTACTGCTTGTGGCGAGATTTTTCCCAAAGCGCAACTCCTCGAACAGCATCAATCGATTAAACACGCTGTGTCGGAGCTTGCTGATTCGGATTCTGGAAAGAATATTGTTCGGATTATTTTCGAAACTGGATGGACGAGTAGAGAAAAAAGCCCTAAAATCCTTCGAATCTTGAAAATCCACAATAGTCAGAAGATTCTTTCCAGATTTGAAGAGTATAGAGAGACGGTGAAGGCGAAAGCGGCTATACACGGCGGCGTAAAGCGGCGGGATGAGCGGTGCATTGCCGACGGGAACGAGCTTCTGAGGTTTCATTGTTCGACGTTTTTATGCGATTTGGGGCAAAATGGTAATTCCAGTCTTTGCGGGCAGCAATTTTGTAGTATTTGTGGGATAATTAAATCGGGATTCTCACACAAGTTGGATGGAATTTCGACACTATCGAGTAGCTGGAGGGCACACGTGGCGATCCCTGAGGACATCGAAGAGGAGTTCAAGTTTCTGAATGCGAAGCGGGCGATTTTGGTTTGTCGGGTTGTGGCGGGTCGGGTCGGCTCAGACGCCGATGAGCCGGAAAAAGACGGCGGAGGGTTTGACTCCGTCGTTGGGAGGAGTGGGAGTGGGGCCCAGACCACGTTGGATGAAGAAGAGCTGTTGGTTTTCAATCCGAGGGCTGTGCTCCCCTGCTTCGCGATTGTATACGAAATCTAA | 1116 | 50.54 | MAPIPRSLSHKFFFLLLLILHVGCFLLTTADHRRRRHHRPTPSCLKPHKLKSLASSFSFLKRIFSSKTCKMAIETARSPSTPARSSQHSIVTLIQQEIPPPPIPETHPPTGTPQDSDITTAEPNQSFPLRNDIFPCTACGEIFPKAQLLEQHQSIKHAVSELADSDSGKNIVRIIFETGWTSREKSPKILRILKIHNSQKILSRFEEYRETVKAKAAIHGGVKRRDERCIADGNELLRFHCSTFLCDLGQNGNSSLCGQQFCSICGIIKSGFSHKLDGISTLSSSWRAHVAIPEDIEEEFKFLNAKRAILVCRVVAGRVGSDADEPEKDGGGFDSVVGRSGSGAQTTLDEEELLVFNPRAVLPCFAIVYEI | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 33609895 | 33611010 | - | ClG42_02g0201900.10 | Clacu02g2019 | 244087 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu02g2019 | 371 | MobiDBLite | consensus disorder prediction | 110 | 124 | - | - | |
Clacu02g2019 | 371 | SUPERFAMILY | ADP-ribosylation | 160 | 370 | - | - | |
Clacu02g2019 | 371 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 136 | 157 | IPR013087 | - | |
Clacu02g2019 | 371 | Gene3D | - | 158 | 370 | - | - | |
Clacu02g2019 | 371 | MobiDBLite | consensus disorder prediction | 98 | 124 | - | - | |
Clacu02g2019 | 371 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 134 | 162 | IPR013087 | - | |
Clacu02g2019 | 371 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 58 | 369 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu01g0395 | Clacu-Chr1:4016649 | Clacu02g2019 | Clacu-Chr2:33609895 | 1.70E-28 | dispersed | |
Clacu02g2019 | Clacu-Chr2:33609895 | Clacu03g0934 | Clacu-Chr3:12157026 | 9.50E-53 | dispersed | |
Clacu02g2019 | Clacu-Chr2:33609895 | Clacu10g0612 | Clacu-Chr10:8293674 | 1.30E-46 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
47318 | None | None | None | None | Clacu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu02g2019 | - | - | - | 0.0 |