Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g2159 ATGGCCGGAGGTGCCGCCGGAAGGTCCTTGGAAGAGACGCCGACGTGGGCCGTCGCCGCCGTCTGCTTTGTTTTGGTTCTAATTTCTATCATCATCGAACACATTCTCCATCTCATCGGAAAGTGGCTAAAGAAGAAGCATAAACGAGCTCTCAACGAAGCTCTCGAGAAGATCAAATCAGAGCTGATGTTGTTGGGATTCATATCGCTGCTGCTGACGGTGGGACAAAGCTTAATCACCAATGTTTGTATTCCACCGAACGTGGCTGCCACGTGGCATCCATGTAGTCCTCAAAGAGAACAGGAATTAACCAAACAAGCTGACCTTCTTCTCGATTCTTCCGACCATAATCGCCGGAAACTTCTCGCCGTCTCCCATGTCAATGCCACTTTCCGCCGTGCTCTCGCCGCTGCCGGTGGAACCGATAAATGTGCTGCTAAGGGTAAAGTCCCGTTTGTTTCGGAAGGAGGTATTCATCAGCTACATATATTCATCTTCGTGTTGGCTGTTTTCCACGTTTTGTATTGTGTCTTAACTCTAGCGTTGGGCAATGCCAAGATGAGAAGTTGGAAGTCGTGGGAAAAGGAGACTAGAACCGTGGAGTACCAATTTTCACATGATCCAGAACGGTTTCGATTTGCAAGGGACACATCATTCGGGAGAAGACATTTAAGCTTTTGGACCAAATCTCCTTTCCTCATATGGATTGTTTGTTTCTTCAGACAATTCGTAAGGTCAGTTCCAAAGGTTGATTACTTGACCTTAAGACATGGTTTCGTCATGGCTCATTTGGCACCACAAAGCGATCAAAAATTTGACTTTCAAAAATACATCAAACGCTCTCTTGAAGAAGATTTCAAGGTGGTGGTCAGTATCAGCCCTCCGATCTGGTTCTTCGCTGTTCTCTTCCTACTTTTCAACACCCACGGCTGGAGGGCTTATCTATGGCTACCATTTGTGCCATTAGTTATAGTTTTGTTGGTAGGGACTAAATTGCAAGTGATAATAACGAAAATGGCCCTGAGGATACAAGAAAGAGGGGAAGTGGTGAAGGGAGTGCCAGTGGTAGAGCCAGGGGATGACCTTTTTTGGTTCAATCGCCCTCGTCTTATTCTTTACTTAATCAATTTTGTGCTCTTTCAAAACGCTTTTCAGCTTGCTTTCTTTGCTTGGACTTGGAAAGAATTTGGGATGAAATCTTGTTTCCATGAGCACACAGAGGATTTGGTGATCAGAATAACAATGGGAGTCTTGGTTCAAATCCTTTGCAGTTACGTTACATTGCCTCTTTACGCTCTAGTCACACAGATGGGTTCGACGATGAAGCCCACAATTTTCAATGAAAAAGTAGCGACAGCATTGAGAAACTGGCACCACACAGCTCGCAAACACATCAAGCAAAATCGTGGCTCACTAACGCCAATGTCCAGCCGCCCCACCACCCCCTCCCACCACATGTCGCCGGTCCACCTCCTCCGCCACTACCGGAGCGAATTGGATAGCGTCCATACCTCTCCTAGAAGATCCAATTTCGACAACGACCATTGGGACCCAGATTCCCCCTCTCCTTCCCACCACTTCCACCGTCGCCCCCAAGCCGCCGACGGCTCCGGTTCCTACAGCCACCATCATCGCGATGTGGAGGCCGGTGATGTCGATGTCGTCAATGATTCGACCCGACCCAACCCGACAACCAATTCAAGGGATCCAGATGTTCAACGAACGAATAATAATTCCGAGCAACATGAAATTGATGTGGGACCCAGTGATTTTTCGTTTGATAGAAGAGTTAATAAAGTATGA 1803 47.2 MAGGAAGRSLEETPTWAVAAVCFVLVLISIIIEHILHLIGKWLKKKHKRALNEALEKIKSELMLLGFISLLLTVGQSLITNVCIPPNVAATWHPCSPQREQELTKQADLLLDSSDHNRRKLLAVSHVNATFRRALAAAGGTDKCAAKGKVPFVSEGGIHQLHIFIFVLAVFHVLYCVLTLALGNAKMRSWKSWEKETRTVEYQFSHDPERFRFARDTSFGRRHLSFWTKSPFLIWIVCFFRQFVRSVPKVDYLTLRHGFVMAHLAPQSDQKFDFQKYIKRSLEEDFKVVVSISPPIWFFAVLFLLFNTHGWRAYLWLPFVPLVIVLLVGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQLAFFAWTWKEFGMKSCFHEHTEDLVIRITMGVLVQILCSYVTLPLYALVTQMGSTMKPTIFNEKVATALRNWHHTARKHIKQNRGSLTPMSSRPTTPSHHMSPVHLLRHYRSELDSVHTSPRRSNFDNDHWDPDSPSPSHHFHRRPQAADGSGSYSHHHRDVEAGDVDVVNDSTRPNPTTNSRDPDVQRTNNNSEQHEIDVGPSDFSFDRRVNKV 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34760712 34767141 + ClG42_02g0215900.10 Clacu02g2159 244227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g2159 600 MobiDBLite consensus disorder prediction 557 585 - -
Clacu02g2159 600 MobiDBLite consensus disorder prediction 500 600 - -
Clacu02g2159 600 MobiDBLite consensus disorder prediction 500 532 - -
Clacu02g2159 600 MobiDBLite consensus disorder prediction 539 553 - -
Clacu02g2159 600 MobiDBLite consensus disorder prediction 463 486 - -
Clacu02g2159 600 PANTHER MLO-LIKE PROTEIN 1 2 533 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Clacu02g2159 600 MobiDBLite consensus disorder prediction 467 484 - -
Clacu02g2159 600 Pfam Mlo family 7 495 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g2159 Clacu-Chr2:34760712 Clacu05g2283 Clacu-Chr5:31197283 6.40E-192 dispersed
Clacu01g2416 Clacu-Chr1:34738407 Clacu02g2159 Clacu-Chr2:34760712 2.80E-122 transposed
Clacu02g1056 Clacu-Chr2:17875631 Clacu02g2159 Clacu-Chr2:34760712 4.20E-118 transposed
Clacu06g0055 Clacu-Chr6:736365 Clacu02g2159 Clacu-Chr2:34760712 1.80E-105 transposed
Clacu02g2159 Clacu-Chr2:34760712 Clacu03g0233 Clacu-Chr3:2666744 2.80E-256 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g2159 K08472 - csv:101212018 1072.0