Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g2315 ATGGAACAAACAAAGTACAGAGCCGATCTTCTTTCATCCCTCTTCCTTGTCCTCATCCTTTTCCTCTCCCTTTCCGGCCGATCCGCCGTTCATGCCTACAAGAACTACACCGTCGGAGATTCCCTCGGTTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTACCAAGAATGGACCGCTGGCAAGACCTTCGGCCTCGGCGATTTTCTAATTTTTAACACGGACAACAATCACTCGGTTGTGCAAACATACAATTTCACCACATACAAGCTTTGTGACTATGACGACGCATCGGAAAACGACACGATGGAATGGTCTGCTGCCGACCCGTCGGCGACCACTCCCTACGCCGTGACCGTGGCTGTCCCATTGGTGAAAGAAGGGACCAACTATTTCTTCTCTGGCAACTACGACGGAGAGCAATGCCAAAATGGCCAACAATTCAAAATAAACGTCACCCATGGACAAGGCCTCCCAAAAAGCATGAGAGATTCTTCCGACGAAGCTCCGGCTCCAGTAGTTCCCGACACCGGTGACCAAACCGAAGCTGCACCCGACACCATCGTCCCTTCCAGCTTCGACAATCCTCGAAACGACGTCGCTGATAGCGACAAGGAAGCTTCAGGCTCCGACTCGTTATCGCTTTGCATCAAGTTTAATGAGCTATTCTTCTTGTTAGCTGGTATTGTTTCTGCCTGCTTTTTTCTTTGTACTGAGTGA 720 50.0 MEQTKYRADLLSSLFLVLILFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQEWTAGKTFGLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDDASENDTMEWSAADPSATTPYAVTVAVPLVKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQTEAAPDTIVPSSFDNPRNDVADSDKEASGSDSLSLCIKFNELFFLLAGIVSACFFLCTE 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36231251 36235374 + ClG42_02g0231500.10 Clacu02g2315 244383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g2315 239 ProSiteProfiles Phytocyanin domain profile. 34 154 IPR003245 GO:0009055(InterPro)
Clacu02g2315 239 FunFam Early nodulin-like protein 18 33 155 - -
Clacu02g2315 239 Pfam Plastocyanin-like domain 46 146 IPR003245 GO:0009055(InterPro)
Clacu02g2315 239 SUPERFAMILY Cupredoxins 34 152 IPR008972 -
Clacu02g2315 239 Gene3D - 33 157 IPR008972 -
Clacu02g2315 239 PANTHER BLUE COPPER PROTEIN 18 166 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Clacu02g2315 239 MobiDBLite consensus disorder prediction 156 210 - -
Clacu02g2315 239 CDD Phytocyanin 34 152 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g2315 Clacu-Chr2:36231251 Clacu06g0030 Clacu-Chr6:525183 4.10E-33 dispersed
Clacu02g2315 Clacu-Chr2:36231251 Clacu08g1287 Clacu-Chr8:22803977 3.40E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g2315 - - - 0.0