Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g2334 ATGTCTTCTTCCGGAATCTCTACCCAAAGCGCCGAATTGTCAGATGCCGTTCAAGAACTAGTAATTTGCGAGCAGTTGGAAATGGGAAAGAAGGTAGAGATTCAAGGAACGGGGAATGGGAGTCATGATGGGGCTTGTGCAATTTGCTTAAATAAGATAGCACTTCAAGAAACTGCTTTAGTGAGAGGCTGCGAGCACGCCTATTGTGCGACTTGCATCCTTCGATGGGCCTCATACACTCAAAAACCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGCATCCATGACTATATGTTCGAGGAGAGTGTATGCCTGCTTTTGAGAGCTTCGTGGTACAAACCACTGATCGTTGAAGAGCGGGAGGAAACCTATGATGATCCTGAGGACGATCAATACTATCCTTATGATCCTTATGAGGATGACAATGAAGAGTTTGAGGATGCTTACCTGGGTGTATCACCAAGTCTCCGTATCGGAAATCGAAGGTGGGGAGACAATGGATACGTGAGGGCAGGTCGACAAGAAGCCCGACCAGTTCTTAGGTCCGAGTTTGCTGGACCTAGTTCATCGAGGGAGCCTGTAACGAAACATGCTTCCAAAGATAAAACAGGTCGACGAGCTAAAAGGGCCCTGAAACGGGAAGCTGCTGATAAAGCAGCAGCAGCTAAGCATCAAGAACATCTGGCTAGGATGAGCCATTGA 735 47.07 MSSSGISTQSAELSDAVQELVICEQLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIGNRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARMSH 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36412047 36415485 - ClG42_02g0233400.10 Clacu02g2334 244402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g2334 244 ProSitePatterns Zinc finger RING-type signature. 64 73 IPR017907 -
Clacu02g2334 244 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 3 242 - -
Clacu02g2334 244 SMART ring_2 46 88 IPR001841 -
Clacu02g2334 244 CDD RING-HC_Topors 43 92 - -
Clacu02g2334 244 MobiDBLite consensus disorder prediction 194 244 - -
Clacu02g2334 244 Pfam Ring finger domain 45 89 IPR001841 -
Clacu02g2334 244 SUPERFAMILY RING/U-box 45 96 - -
Clacu02g2334 244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 27 112 IPR013083 -
Clacu02g2334 244 ProSiteProfiles Zinc finger RING-type profile. 46 89 IPR001841 -
Clacu02g2334 244 MobiDBLite consensus disorder prediction 219 244 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g2334 - - - 0.0