Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g2419 ATGGCATTCCAGGGTGATGTTCGAGCCGGAGCCAAGCTCATTCGCTTTCACTTCCACGATTGCTTCGTCAATGGTTGTGATGGATCGGTTTTACTAGAGAATCAAGATGGTGTGGAAAGCGAGTTAGATGCTCCAGGGAACCAAGGAATACAAGGCTTTGACATTGTCGACAACATAAAAGCTGCAGTTGAAGCTGCCTGCCCAAACACCGTGTCTTGTGCTGACATCTTAGCCCTTTCCTCTCGTGAATCTGTCATCTTGACGGGAGGGCCAAGTTGGGTAGTTCAATTGGGAAGAAGAGATAGCAGAAACGCAAATAGAACTGGAGCTGAAAACAATCTCCCAAGCCCTTTCGAAACACTCGATCAACTTCGGGTAAAATTTAATGCAGTTGGTCTCGATTCTACCGATCTTGTGGCTTTATCTGGAGCGCATACGTTCGGAAGGTCAAGATGCGTATTCTTCAGCGGGCGGCTAAGCAATTTCAGCGGTACCGGAAGTCCAGACCCGACTCTTGACCCGACGTTACGGGATGCACTGGTCATCGCTTGTCCGACCGGCGACGGAAACAACCGCATCGCACTTGACGTGGCGACGCCGGACAGCTTCGACAATGCATACTACACCAATCTGGTCAACAACCGTGGGCTTCTCCAATCGGATCAAGAGCTGTTCTCAACCGAAGGGGCGGAAACCATCGCCACCGTGAACCGTTTTGCCGGCAACCAATCTGATTTCTTTGGTCAGTTCGGTCAGTCTATGATAAACATGGGGAACCTCCAACCATTACTTGGGCCCAATGGAGAAATCAGGTCCAATTGTAGGCGGGTTAATCCTTTGAATATTACCACTGGTGCTGCTACTGCTTTTATGTAA 876 49.54 MAFQGDVRAGAKLIRFHFHDCFVNGCDGSVLLENQDGVESELDAPGNQGIQGFDIVDNIKAAVEAACPNTVSCADILALSSRESVILTGGPSWVVQLGRRDSRNANRTGAENNLPSPFETLDQLRVKFNAVGLDSTDLVALSGAHTFGRSRCVFFSGRLSNFSGTGSPDPTLDPTLRDALVIACPTGDGNNRIALDVATPDSFDNAYYTNLVNNRGLLQSDQELFSTEGAETIATVNRFAGNQSDFFGQFGQSMINMGNLQPLLGPNGEIRSNCRRVNPLNITTGAATAFM 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37168532 37170063 + ClG42_02g0241900.10 Clacu02g2419 244487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g2419 291 FunFam Peroxidase 115 257 - -
Clacu02g2419 291 ProSitePatterns Peroxidases proximal heme-ligand signature. 137 147 IPR019793 -
Clacu02g2419 291 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g2419 291 PRINTS Haem peroxidase superfamily signature 10 24 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g2419 291 PRINTS Haem peroxidase superfamily signature 137 152 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g2419 291 PRINTS Haem peroxidase superfamily signature 71 88 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g2419 291 PRINTS Haem peroxidase superfamily signature 89 101 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g2419 291 SUPERFAMILY Heme-dependent peroxidases 3 279 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g2419 291 CDD secretory_peroxidase 2 277 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Clacu02g2419 291 PRINTS Plant peroxidase signature 252 265 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g2419 291 PRINTS Plant peroxidase signature 12 32 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g2419 291 PRINTS Plant peroxidase signature 194 209 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g2419 291 PRINTS Plant peroxidase signature 51 64 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g2419 291 PRINTS Plant peroxidase signature 89 104 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g2419 291 PRINTS Plant peroxidase signature 136 148 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g2419 291 PRINTS Plant peroxidase signature 70 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g2419 291 PRINTS Plant peroxidase signature 210 227 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g2419 291 Gene3D Peroxidase, domain 2 115 257 - -
Clacu02g2419 291 PANTHER PEROXIDASE 72-RELATED 2 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g2419 291 ProSiteProfiles Plant heme peroxidase family profile. 1 278 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g2419 291 Pfam Peroxidase 2 241 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g2419 291 Gene3D - 2 278 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g2419 Clacu-Chr2:37168532 Clacu02g2421 Clacu-Chr2:37183597 3.90E-102 dispersed
Clacu02g2418 Clacu-Chr2:37159050 Clacu02g2419 Clacu-Chr2:37168532 2.40E-77 tandem
Clacu02g2419 Clacu-Chr2:37168532 Clacu02g2420 Clacu-Chr2:37175620 3.00E-110 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g2419 K00430 - csv:101217743 521.161