Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g2491 ATGAAGCAATGGAGAGGCTTAAATTCAGAATCTCTTGCAACCTTATGGGTATTGTGCACAGCTCTAGCTCTAGCTCCAGCTCCATTTGTTGGATCGGTCTCATCTCCAAAGCACCAATTTCGTGGAATTTCTCCCCAAGATGAGATGTATTACAAGTCGTCGGACATGATCAAATGTAGAGACGGTTCCAACAAATTTTCCAAGGCTCAGCTTAACGATAACTACTGCGATTGCCCTGATGGCACTGACGAACCTGGCACATCTGCATGCCCGAATGGGAAGTTCTATTGTCGAAATGCAGGGCACGTTCCACTTTTATTGTTTTCTTCAAGGGTGAACGACGATATATGTGATTGTTGTGATGGAAGTGACGAATATGACAGCAAAGTCAAATGCCCAAATACGTGCTGGGAAACTGGGAAAGTGGCAAGAGATAAATTGAAGAAAAAGATTTCAACCTTTGAAGAAGGTGTTAAAATTAGAAAACAAGAAGTCGAACAGGCAAAAATTGCAATAATCAAGGATGAGGCAGAGCTATTGAAGTTGAAAGATGAGGAAAAAGTATTAAAAGGACTCGTTGAACAACTCAAAGAGCGCAAAGAACAAATAGAGAAGGTAGAAGAGGAGGAGCGATTATGGAAAGAAAAAGAGGAAAAGAAACGTTTGGAGAGAGAAAAAGATGGGACTAAAAAAACTGAGTCAGAAACAACTACTGTTGGGGAAAGCAAAACTCATGAAGAAGACAATTGGAAAAAAAATGAAGCTATAGAAAATTATGACAAGGAATATAAACAAGGAGAAGGCAACGATGATGATAAAATTGGGAACTGGGAGGACTCTGCCACAGATCAGGCTAGGATGGAAGAAGAAGTTGATTCAGAACTCGAAGCTCAACTTTCTAATAAACCTGAAACAGAAGCATCATTGCTGAAAGAGGATACAGCAGGAGAGAACGACGAACCCTTGGCTAAATCTGAAACTGGAGAAAATGCTGGCACTAAAGAATCATCTGAAGAAGTCCTGAGAAAGAATGATGCTAGTTCAGAGTTGTCAAGGGAAGAGTTGGGCCGTCTTGTTGCTTCTCGTTGGACAGGAGAAAATACTGAAGAACAGTCAGGGAACATGGATAGTACAAACGATAGTGATGAAGAAAGTCATGATATCTCAAAAGACACACATGAAAATGACGGTTATGCTTCAGAGACTGATGATGATAACCAAAGATACGATGATGACCTAGAGGGTGATTTAGAAGATATCAGAGATGAATTTCGTGATGATTCTACTTCGTCTGAAAGATATTATTCAGATACAGAATTGGACTCACCAGATGTGGATACCCAAAGTAACCCGTCCTGGCTTGAGAAGATACAAAAAACTGTTCGAAATGTCCTCAAAGCTGTCAATATATTCCAGTCTCCAGTGAACCAATCAGATGCTGCTAACGTGCGCAAGGAATATGATGAGTCCAGTGCCAAGTTATCAAAAATACAGTCAAGGATCTCAAGTTTATCACAGAAGCTAAAGAATGATTTTGGTCCAGAGAAGGAGTTCTATTCATTCTATGACCAATGTTTTGAAAGCAAGGAGAACAAATACGTTTACAAAATCTGTCCTTATAAACAAGCTTCGCAGGTTGAAGGGCACTCAACTACTCGTTTGGGGCGCTGGGATAAATTTGAGGACTCATATAGGGTTATGATCTTTTCAAGTGGGGATACGTGCTGGAATGGACCTGATAGAAGCTTAAAGGTCAAGCTAAGATGTGGGCTTAAAAATGACATAACCGATGTAGATGAACCAAGCCGTTGCGAGTACGTGGCATTGTTATCAACCCCAGCTGCTTGTGTAGAGGAAAAGCTTCAGGAACTGAAACACAAGTTGGACATGCTGAGTAAAGAAGAGGCAGAGAAGCATGATGAACTTTGA 1929 40.69 MKQWRGLNSESLATLWVLCTALALAPAPFVGSVSSPKHQFRGISPQDEMYYKSSDMIKCRDGSNKFSKAQLNDNYCDCPDGTDEPGTSACPNGKFYCRNAGHVPLLLFSSRVNDDICDCCDGSDEYDSKVKCPNTCWETGKVARDKLKKKISTFEEGVKIRKQEVEQAKIAIIKDEAELLKLKDEEKVLKGLVEQLKERKEQIEKVEEEERLWKEKEEKKRLEREKDGTKKTESETTTVGESKTHEEDNWKKNEAIENYDKEYKQGEGNDDDKIGNWEDSATDQARMEEEVDSELEAQLSNKPETEASLLKEDTAGENDEPLAKSETGENAGTKESSEEVLRKNDASSELSREELGRLVASRWTGENTEEQSGNMDSTNDSDEESHDISKDTHENDGYASETDDDNQRYDDDLEGDLEDIRDEFRDDSTSSERYYSDTELDSPDVDTQSNPSWLEKIQKTVRNVLKAVNIFQSPVNQSDAANVRKEYDESSAKLSKIQSRISSLSQKLKNDFGPEKEFYSFYDQCFESKENKYVYKICPYKQASQVEGHSTTRLGRWDKFEDSYRVMIFSSGDTCWNGPDRSLKVKLRCGLKNDITDVDEPSRCEYVALLSTPAACVEEKLQELKHKLDMLSKEEAEKHDEL 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37748745 37775410 + ClG42_02g0249100.10 Clacu02g2491 244559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g2491 642 MobiDBLite consensus disorder prediction 331 356 - -
Clacu02g2491 642 ProSiteProfiles MRH domain profile. 523 618 IPR044865 -
Clacu02g2491 642 MobiDBLite consensus disorder prediction 405 421 - -
Clacu02g2491 642 MobiDBLite consensus disorder prediction 379 404 - -
Clacu02g2491 642 Gene3D - 518 617 IPR009011 -
Clacu02g2491 642 Coils Coil 480 500 - -
Clacu02g2491 642 MobiDBLite consensus disorder prediction 218 299 - -
Clacu02g2491 642 MobiDBLite consensus disorder prediction 422 440 - -
Clacu02g2491 642 Coils Coil 165 232 - -
Clacu02g2491 642 SUPERFAMILY Mannose 6-phosphate receptor domain 523 616 IPR009011 -
Clacu02g2491 642 MobiDBLite consensus disorder prediction 306 324 - -
Clacu02g2491 642 Coils Coil 614 641 - -
Clacu02g2491 642 Pfam Glucosidase II beta subunit-like protein 484 642 IPR036607 -
Clacu02g2491 642 MobiDBLite consensus disorder prediction 218 451 - -
Clacu02g2491 642 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 21 625 IPR039794 GO:0006491(PANTHER)|GO:0017177(PANTHER)
Clacu02g2491 642 Pfam Glucosidase II beta subunit-like 34 170 IPR028146 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0229 Clacu-Chr2:2172594 Clacu02g2491 Clacu-Chr2:37748745 3.40E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g2491 K08288 - csv:101221877 1089.72