Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g0008 ATGAGAGCGGGCTTGTCCAATGCTAGCTGCGGCTACCCCTGCCGTGATTCGTGCATGGTCCCGGAGGGTCGAGAGACGGAACTCCCTACTTCGGAGTCCTCTCTGTCGAACTATGAACACTTTTTAGGACCTTTCGAGAGCACTGGAGCAAGCAACAGGGTATACATCATCTGCTTGAATTTTTGTACATCCAAGAGCTACACCATGGATCTTGTCCTGTTGGAGAAGGCTCTAGTGGGGATCTTCGTGGCCATGGTTGTTGCCATTAGCATATCCAAATTGAGGGGCAAGCGTTTTAAACTCCCACCAGGTCCCATTCCCATCCCCATATTTGGGAATTGGCTGCAGGTTGGGGATGACTTGAACCACCGCAACTTGACGGAGCTGGCCAAAAAGTTCGGTGACATATTGCTGTTGAGAATGGGGCAACGAAACTTGGTGGTGATTTCTTCACCAGAGTTGGCCAAGGAAGTGCTACACACCCAAGGAGTAGAATTTGGGTCTAGGACAAGAAACGTGGTGTTCGATATCTTCACAGATAAGGGTCAAGATATGGTGTTCACGGTGTACGGCAAGCACTGGATGAAAATGAGGCGAATCATGACCATTCCTTTTTTCACCAATAAGGTGGTTCAGCAGAACAGGTTTAGTTGGGAGGACGAGGCTGCCAGAGTTGTGGAGGATCTAAAGAATAACCCAGAAGCCTCAACCACCGGCGTGGTTCTGAGGAAGCGGCTACAGCTTCTAATGTATAACAATATGTACAGAATGATGTTTGACAAGAGATTCGACAGCATGGAAGACCCTCTGTTCAATAACCTTAAGCATATAAACGCAGAGAGGAGTCGACTATCTCAGAGCTTTGAATACAACTATGGTGATTTCATCCCCATACTCAGGCCTTTCCTTAGAGGCTATTTGAATGTGTGTAAGGATGTCAAAGAGAGGAGGCTCAAGCTCTTCAAAGACCATTTTGTCGATGAGAGGAGGAGACTAACTAGCACCATGAGCAACAAGGAGGATGGTGTAAAATGTGGCATTGATCATATTGTGGAGGCTCAAGAGAATGGTGAGATCACCGAAGACAATGTTCTCTTCATTGTTGAGAATATCAACGTTGCTGCTATTGAGACAACATTGTGGTCAATGGAGTGGGCTATTGCGGAGCTAGTTAACCACCCCAACATCCAGAAAAAGCTGAGGGACGAGCTCGATTTGGTGCTCGGATATGGCGTCCAAATTATGGAGCCCGACATTCGCAATCTACCTTACTTGCAGGCTGTCATCAAGGAGACTTTGCGGTTGAGAATGGCCATTCCTTTGTTAGTGCCTCACATGAATCTCCAAGACGCCAAGTTGGCTTCTTATGACATCCCGGCAGAAAGCAAGATTCTAGTGAATGCATGGTGGCTGGCCAACAACCCTGATCACTGGAACAAACCTCAAGAATTCCGACCTGAGAGGTTTTTGGAGGAGGAGCAACATGTAGATCCTATAGGGAATGACTTTAGATACCTTCCTTTCGGTGCCGGAAGGAGGAGCTGCCCTGGCATTGTTCTTGCCTTGCCCATCGTTGCTATTACTTTGGGTCGTCTCATTCAAAATTTTGAGCTGCTGCCTCCTCTTGGACACTCCAAGATTGATACCACCGAAAAGCCTGGACAGTTCAGCTTGCAAATATTCAACCACTCTACTATTGTGGCAAAGTCAAGGTCTTTATGA 1722 47.21 MRAGLSNASCGYPCRDSCMVPEGRETELPTSESSLSNYEHFLGPFESTGASNRVYIICLNFCTSKSYTMDLVLLEKALVGIFVAMVVAISISKLRGKRFKLPPGPIPIPIFGNWLQVGDDLNHRNLTELAKKFGDILLLRMGQRNLVVISSPELAKEVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGKHWMKMRRIMTIPFFTNKVVQQNRFSWEDEAARVVEDLKNNPEASTTGVVLRKRLQLLMYNNMYRMMFDKRFDSMEDPLFNNLKHINAERSRLSQSFEYNYGDFIPILRPFLRGYLNVCKDVKERRLKLFKDHFVDERRRLTSTMSNKEDGVKCGIDHIVEAQENGEITEDNVLFIVENINVAAIETTLWSMEWAIAELVNHPNIQKKLRDELDLVLGYGVQIMEPDIRNLPYLQAVIKETLRLRMAIPLLVPHMNLQDAKLASYDIPAESKILVNAWWLANNPDHWNKPQEFRPERFLEEEQHVDPIGNDFRYLPFGAGRRSCPGIVLALPIVAITLGRLIQNFELLPPLGHSKIDTTEKPGQFSLQIFNHSTIVAKSRSL 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 311668 314882 + ClG42_03g0000800.10 Clacu03g0008 244573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g0008 573 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 508 517 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu03g0008 573 SUPERFAMILY Cytochrome P450 102 557 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g0008 573 Gene3D Cytochrome P450 92 566 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g0008 573 PRINTS E-class P450 group I signature 467 491 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g0008 573 PRINTS E-class P450 group I signature 426 444 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g0008 573 PRINTS E-class P450 group I signature 249 267 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g0008 573 PRINTS E-class P450 group I signature 130 149 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g0008 573 PRINTS E-class P450 group I signature 154 175 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g0008 573 PRINTS E-class P450 group I signature 363 380 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g0008 573 PRINTS E-class P450 group I signature 515 538 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g0008 573 PRINTS E-class P450 group I signature 505 515 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g0008 573 PRINTS E-class P450 group I signature 383 409 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g0008 573 CDD CYP73 131 564 - -
Clacu03g0008 573 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 69 571 - GO:0004497(PANTHER)|GO:0009808(PANTHER)|GO:0016710(PANTHER)
Clacu03g0008 573 PRINTS P450 superfamily signature 374 391 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g0008 573 PRINTS P450 superfamily signature 506 515 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g0008 573 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g0008 573 Pfam Cytochrome P450 102 559 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g0008 573 FunFam Trans-cinnamate 4-monooxygenase 91 565 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0008 Clacu-Chr3:311668 Clacu11g1332 Clacu-Chr11:22678922 6.40E-181 dispersed
Clacu02g1948 Clacu-Chr2:33039358 Clacu03g0008 Clacu-Chr3:311668 1.40E-240 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g0008 K00487 - csv:101208511 915.22