Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g0035 ATGGAGAAAGAAAATCTTGAAGAGAAAGAGGCAATGATGTACTTATCGTTGAAGATGAAGTTTCGTCATTGTGAGATTTTGCAATTTGCTAAACCATTGATAAAGCAAATATTCCTTCTTCTTCTTCCACAACCAATCCAATATCCAATATCTCACCAAACCAAACTGTCAACTCAACAACTCAAGAAGAGTGAAGAAGTGAAAGCTAAGTCCATCTCGCCATTGCACACCCAAATCTCTTCTTCACCACACACATGTCGACCACCCACGACCCCCAACTGGTCTGCGTCACCGGCGCCAGTGGCTGTATCGGATCCTGGCTCGTTCACCTCCTCCTCCTCCGCGGCTACTCCGTTCACGCCACCCTCCAAAATCTCAGTTACCCTCCCACTTTCTTCCCTATCTTCCGAGGACGAGAGCGAAACCAAGCATCTGGAAGATTTAGAGGGAGCAGAGGCTCGTCTTCGTCTCTTCCAAATCGACCTCCTCGATTATGACTCCATTGTCCCCGCCGTCACTGGTTGTGCTGGCGTCTTCCACGTCGCGTCTCCTTGCATCGTTGATCCTGTACAAGATCCTGAGAGGGATTTATTGGATCCGGCTATCAAAGGAACCATCAATGTCCTGACGGCGGCCAAGGAGGCTGGGGTACAACGCGTAGTGGTGACTTCTTCTATCTCAGCCATGATTCCGAACCCTAACTGGCCGGCGAATGTTGTAAGGAATGAAGAATGTTGGACCGATATTGATTACTGCAAGAAAAAGGGGCTGTGGTATTCAATTTCAAAAACTCTAGCAGAAAAGGCTGCTTGGGATTTTGCTAAGGAGAAAGGATTGGATGTGGTGGTGATTAATCCAGGCACAGTGATGGGCCCTGTGTTTCCTCCCAGAATTAATGCCAGCATGCAAATGCTTTTAAAACTTCTTCAGGGGTGCAGTGAGACATTCGAGGACGTTTTTATCGGAGTAGTGCACTTTAAAGATGTTGCATTAGCACACATTTTGGTCTATGAAAACAAATCAGCTACAGGAAGGCACTTTTGTGCTGAGGCCATAGCTCGTTACTCTGACTATGTAGCGAAGGCTGCTGAACTCTTCCCTCAGTATAATGTGCCCAGATCGGTAGAAGATACACAGCCTGATTTGGTGAGAGCAAAAGATGGAGCCAAGAAGTTGATGAACCTGGGGCTGGAATTCATCCCAATGGAACAAATTCTCAAGGAAGCCGTTGAGGATCTAAAAAAGAAGGGATATATTTCCTGA 1263 46.71 MEKENLEEKEAMMYLSLKMKFRHCEILQFAKPLIKQIFLLLLPQPIQYPISHQTKLSTQQLKKSEEVKAKSISPLHTQISSSPHTCRPPTTPNWSASPAPVAVSDPGSFTSSSSAATPFTPPSKISVTLPLSSLSSEDESETKHLEDLEGAEARLRLFQIDLLDYDSIVPAVTGCAGVFHVASPCIVDPVQDPERDLLDPAIKGTINVLTAAKEAGVQRVVVTSSISAMIPNPNWPANVVRNEECWTDIDYCKKKGLWYSISKTLAEKAAWDFAKEKGLDVVVINPGTVMGPVFPPRINASMQMLLKLLQGCSETFEDVFIGVVHFKDVALAHILVYENKSATGRHFCAEAIARYSDYVAKAAELFPQYNVPRSVEDTQPDLVRAKDGAKKLMNLGLEFIPMEQILKEAVEDLKKKGYIS 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 519738 523225 + ClG42_03g0003500.10 Clacu03g0035 244600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g0035 420 FunFam Dihydroflavonol reductase 132 420 - -
Clacu03g0035 420 MobiDBLite consensus disorder prediction 71 118 - -
Clacu03g0035 420 Pfam NAD dependent epimerase/dehydratase family 145 346 IPR001509 -
Clacu03g0035 420 Gene3D - 131 420 - -
Clacu03g0035 420 MobiDBLite consensus disorder prediction 67 118 - -
Clacu03g0035 420 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 135 414 IPR036291 -
Clacu03g0035 420 CDD FR_SDR_e 142 397 - -
Clacu03g0035 420 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 130 411 IPR050425 GO:0016616(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0035 Clacu-Chr3:519738 Clacu10g0753 Clacu-Chr10:10960094 7.20E-81 dispersed
Clacu03g0035 Clacu-Chr3:519738 Clacu11g2087 Clacu-Chr11:31671316 2.20E-53 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g0035 - - - 0.0