Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu03g0133 | ATGAAACTGCTTGCCAAGATGTTGCTTCGTTTGATGAATAGCAGTGGAATCATTGCCGTTGGTCTCTTTGTCTTCCTGCTTTGCCTCCAATGGCGCCACCCCAAACACAAACTTCTCCCTCCCGGCTCCATGGGTTGGCCTTATATAGGCGAAACCTTCAAACTTTACACCCAAAACCCGAACTCTTTTTTCTCCATTAGGCAAAAAAGATATGGGGATGTTTTTAAGACACATATATTGGGTTGTCCTTGTGTGATGATTTCAAGTCCAAAGGCTGCAAGAGTTGTGCTTGTGAGTAAGGCTCATCTGTTCAAGCCAACTTATCCACCAAGCAAAGAGAAAATGATAGGTCCTCAAGCTTTGTTCTTCCATCAAGGCCCTTACCATTCTCACCTTAAGAAGTTGATTCAAGCTTCCTTTTTGCCCTCTGCTATTAAAGGCTCTATCTCTCAAATTGAGAACATTGTCCTCCACCTTCTCCCCTCTTGGAATAACTCCCAAATCAACACCTTGCAACAAATGAAAAGGTTTGCTTTTGATGTGGCAATGATATCAGCTTTTGGAGACCAACAAGACTTGGAAATTGAAAGAATCAAACATTTGTACCAATGCCTTGAAAAAGGCTACAATTCTATGCCTCTCGATCTTCCCGGAACTCCTTTCCGCAAAGCAATGAAGGCGAGGAAGGTGCTGAGTGAGACATTGGGGAAATTGATAGAGAAGAGACGGCGGAGCAAAGAGCATGGAGGTGGGTTGCTGGCGGTGCTACTGGGCGGCGGTGGAGAAGAGGCAGAGGATGAGAAAAAGAAGCTGAGTGATTCACAAATAGCAGATAATATAATAGGAGTAATATTTGCGGCACAAGACACGACAGCTAGTGTTTTAACATGGATTCTTAAGTACTTACACGACAATCACCATCTTCTCCAAGCTGTTCAGAAGGAGCAAGAGGCAATTTTTCAAAGGAAAGTGTGCGAAGGAAACCGTGGCCTTTCGTGGGATGATACGAGGCGCATGCCCTTCACTAGTCGGGTGATCCTAGAAACTCTAAGAAGAGCAAGTGTTGTGTCATTCACATTCAGGGAAGCAGTAGAAGAGGTTGAATTTGAAGGTTATTTAATCCCAAGAGGATGGAAAGTTCTTCCACTCTTCAGAACCATTCATCACTCTCCTGATTTCTTCCCACACCCCGAGAACTTTGATCCTTCAAGATTCGAGGTGCCACCTAGACCGAACACATATATGCCATTTGGCAATGGAGTACACTCGTGTCCAGGCAGTGAGATGGCTAAGCTTGAAATGCTTGTTCTTCTCCACCACCTCACCACCACTTACAGATGGAAAGTGGTGGGAGAGGAATCTGGAATACAATACGGTCCATTTCCTGTACCTAAAGGCCCTCCTCTCCTCTCTTTGAAGTGTGAAAGGGCAAAGGACAAAGGACAAAGCTTGGCCTTGCTAAGGCAATGGCAGAGGCAGCAACAACAAACTTTTGGATTTACCATAGCCATCCACAGCCATCCTGAAATGATTGAACATCTGATGCTTGACAATAGTGAATCTAGCAGAGCATGA | 1575 | 44.76 | MKLLAKMLLRLMNSSGIIAVGLFVFLLCLQWRHPKHKLLPPGSMGWPYIGETFKLYTQNPNSFFSIRQKRYGDVFKTHILGCPCVMISSPKAARVVLVSKAHLFKPTYPPSKEKMIGPQALFFHQGPYHSHLKKLIQASFLPSAIKGSISQIENIVLHLLPSWNNSQINTLQQMKRFAFDVAMISAFGDQQDLEIERIKHLYQCLEKGYNSMPLDLPGTPFRKAMKARKVLSETLGKLIEKRRRSKEHGGGLLAVLLGGGGEEAEDEKKKLSDSQIADNIIGVIFAAQDTTASVLTWILKYLHDNHHLLQAVQKEQEAIFQRKVCEGNRGLSWDDTRRMPFTSRVILETLRRASVVSFTFREAVEEVEFEGYLIPRGWKVLPLFRTIHHSPDFFPHPENFDPSRFEVPPRPNTYMPFGNGVHSCPGSEMAKLEMLVLLHHLTTTYRWKVVGEESGIQYGPFPVPKGPPLLSLKCERAKDKGQSLALLRQWQRQQQQTFGFTIAIHSHPEMIEHLMLDNSESSRA | 524 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 1445595 | 1456351 | - | ClG42_03g0013300.10 | Clacu03g0133 | 244698 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu03g0133 | 524 | SUPERFAMILY | Cytochrome P450 | 32 | 471 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g0133 | 524 | FunFam | Abscisic acid 8 | 30 | 473 | - | - | |
| Clacu03g0133 | 524 | CDD | CYP90-like | 67 | 465 | - | - | |
| Clacu03g0133 | 524 | Gene3D | Cytochrome P450 | 31 | 473 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g0133 | 524 | PANTHER | CYTOCHROME P450 26 | 39 | 457 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Clacu03g0133 | 524 | PRINTS | P450 superfamily signature | 286 | 303 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g0133 | 524 | PRINTS | P450 superfamily signature | 344 | 355 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g0133 | 524 | PRINTS | P450 superfamily signature | 424 | 435 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g0133 | 524 | PRINTS | P450 superfamily signature | 415 | 424 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g0133 | 524 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 417 | 426 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu03g0133 | 524 | PRINTS | E-class P450 group I signature | 295 | 321 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g0133 | 524 | PRINTS | E-class P450 group I signature | 424 | 447 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g0133 | 524 | PRINTS | E-class P450 group I signature | 275 | 292 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g0133 | 524 | PRINTS | E-class P450 group I signature | 414 | 424 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g0133 | 524 | PRINTS | E-class P450 group I signature | 68 | 87 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g0133 | 524 | PRINTS | E-class P450 group I signature | 383 | 407 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g0133 | 524 | PRINTS | E-class P450 group I signature | 343 | 361 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g0133 | 524 | Pfam | Cytochrome P450 | 40 | 452 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu03g0133 | Clacu-Chr3:1445595 | Clacu07g1111 | Clacu-Chr7:25750565 | 3.50E-154 | dispersed | |
| Clacu03g0133 | Clacu-Chr3:1445595 | Clacu05g2182 | Clacu-Chr5:30441181 | 3.80E-148 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu03g0133 | K09843 | - | csv:101216531 | 843.958 |