Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g0233 ATGGCGGCTGCAGCCGGTGGCAAGTCGCTCGAGCAAACGCCGACGTGGGCCGTTGCGGTTGTTTGCTTCGTTTTGCTTCTCATCTCTATTTTCATCGAATATAGCCTCCATCTCATCGGACATTGGCTGAAGAAGAGACACAAACGGGCGTTATTTGAAGCACTAGAGAAGATCAAATCAGAGCTTATGTTATTGGGATTCATATCGCTGCTTCTAACAGTGGGGCAAGGTCCAATCACAGAGATATGTATCCCTCAACATGTAGCTGCCACGTGGCATCCATGTACAAAGGAGAAAGAAAGTGAGATGAACAAAATGGGGGATCAATCTGTGCAACATTTGTCTACTAATGGCCGGAGACTCCTCCATCTCGCCGGAAATGGTGGAAGTTTCCGGCGGATTTTGGCCGCGGCCGGAGGAGCCGACAAGTGTGCTGCCAAGGGTCAAGTGTCGTTTATTTCAGCAGAAGGAATTCATCAACTTCATATCTTCATATTTGTGTTGGCTGTTTTCCATGTTTTGTACTGTGTTCTTACTTATGCTTTGGCTAGAGCAAAGATGAGGAGTTGGAAAACTTGGGAAAAAGAGACCAAAACTGCAGAATACCAATTCTCACATGATCCGGAGAGATTTAGGTTTGCAAGAGACACCTCGTTTGGGAGGAGACATTTGAGCTTCTGGACAAAGAATCCTGCCCTAATGTGGATAGTTTGTTTCTTCAGGCAATTTGTAAGATCTGTTCCAAAAGTTGATTACTTGACATTAAGACATGGGTTTATAATGGCACATTTAGCACCTCAAAGTCATACACAATTTGATTTTCAAAAATACATTAATCGATCTCTTGAAGAGGACTTCAAAGTTGTCGTGGGAATCAGCCCACCAATTTGGTTCTTCGCTGTGCTGTTTCTCCTCTCAAACACTCACGGTTGGAGGGCATATCTATGGCTGCCGTTCATCCCACTAATCATTTTGCTGCTGATCGGGACAAAGTTGCAAGTGATCATAACGAAAATGGCACTGAGAATACAAGAAAGAGGAGAAGTAGTGAAGGGCGTGCCAGTGGTTGAGCCTGGCGATGACCTTTTTTGGTTCAATCGCCCTCGCCTTATTCTTTATCTCATCAACTTTGTTCTCTTTCAAAATGCCTTCCAAGTTGCCTTCTTTGCTTGGACTTGGTATGAGTTCGGGTTGAATTCTTGTTTCCATGAGCATACAGAGGATGTGGTGATCCGAATTTCAATGGGGGTGATTGTACAAATCCTTTGCAGTTATGTTACTCTTCCTCTTTATGCACTGGTCACTCAGATGGGTTCAACAATGAAGCCAACTATATTCAATGAGAGAGTGGCAGCGGCCCTTCGCAATTGGTACCACTCGGCTCGGAAGCACATCAAACACAACCGCGGTTCGATCACTCCAATGTCGAGCCGACCTGCCACCCCGACTCACAGCATGTCACCGGTCCACCTTCTCCGTCACTACAAGAGTGAGGTCGATAGCTTCCACAACTCGCCGAGAAGGTCACCATTTGACACTGATCGTTGGGACAACGATTCGCCCTCACCGTCCCGTCATGCTGATGGTTCGTCTTCATCACAACCCCACATCGAGATGGGAGGCTATGACAAAGATCCGACCGAACCGGGGTCGACTCAAATTGACCCGGTTCAATCATCTCAAACCCGGACTCAACATGAGATTCAAATTGGCGGCCCCAAAGACTTTTCCTTTAACAGAACAGAGTGA 1749 46.37 MAAAAGGKSLEQTPTWAVAVVCFVLLLISIFIEYSLHLIGHWLKKRHKRALFEALEKIKSELMLLGFISLLLTVGQGPITEICIPQHVAATWHPCTKEKESEMNKMGDQSVQHLSTNGRRLLHLAGNGGSFRRILAAAGGADKCAAKGQVSFISAEGIHQLHIFIFVLAVFHVLYCVLTYALARAKMRSWKTWEKETKTAEYQFSHDPERFRFARDTSFGRRHLSFWTKNPALMWIVCFFRQFVRSVPKVDYLTLRHGFIMAHLAPQSHTQFDFQKYINRSLEEDFKVVVGISPPIWFFAVLFLLSNTHGWRAYLWLPFIPLIILLLIGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQVAFFAWTWYEFGLNSCFHEHTEDVVIRISMGVIVQILCSYVTLPLYALVTQMGSTMKPTIFNERVAAALRNWYHSARKHIKHNRGSITPMSSRPATPTHSMSPVHLLRHYKSEVDSFHNSPRRSPFDTDRWDNDSPSPSRHADGSSSSQPHIEMGGYDKDPTEPGSTQIDPVQSSQTRTQHEIQIGGPKDFSFNRTE 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2666744 2675742 - ClG42_03g0023300.10 Clacu03g0233 244798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g0233 582 MobiDBLite consensus disorder prediction 551 568 - -
Clacu03g0233 582 MobiDBLite consensus disorder prediction 499 582 - -
Clacu03g0233 582 MobiDBLite consensus disorder prediction 523 537 - -
Clacu03g0233 582 Pfam Mlo family 8 495 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Clacu03g0233 582 MobiDBLite consensus disorder prediction 499 522 - -
Clacu03g0233 582 PANTHER MLO-LIKE PROTEIN 1 3 528 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g1056 Clacu-Chr2:17875631 Clacu03g0233 Clacu-Chr3:2666744 3.00E-116 dispersed
Clacu03g0233 Clacu-Chr3:2666744 Clacu08g1088 Clacu-Chr8:20867670 1.10E-132 dispersed
Clacu03g0233 Clacu-Chr3:2666744 Clacu03g0235 Clacu-Chr3:2721679 9.10E-135 proximal
Clacu05g2283 Clacu-Chr5:31197283 Clacu03g0233 Clacu-Chr3:2666744 5.50E-189 transposed
Clacu02g2159 Clacu-Chr2:34760712 Clacu03g0233 Clacu-Chr3:2666744 2.80E-256 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g0233 K08472 - csv:101217225 1096.26