Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g0235 ATGGCCGCCGCCGCCGTGGATCCTTCCTCTCTCCAATTCACGTCGACTTGGGCCGTGGCTGCTGTCTGCTTCATCTTCATCTCCCTCTCTCTCTTCCTCGAGCATTTGATTCATCTCCTCTCAAATTGGTTGAAGCGGAAGAGGAAAGCGGCATTGTTCGAGGCGGTTGAGAAGCTAAAATCAGTATTGATGCTTCTAGGATTCATGTCGCTAACTCTGACGGTAACTCAACAACCAGTATCTAAAATTTGCATACCAAACAGCGTAGCGTATACGATGCTTCCGTGCCAGAGAGAATTACAGATCACAGCGAATAAGAATTTAGAGATGGAGAAATTGCGATCAAATCAGTCGTTTTCATGGCTGCCGGAAAAAATTGATAGTAGTAGTAGCAGCGATTCTTCTTCTTCTTCTTCATCTTCCTCTTCTTCCGATTACTGTACTGCGAAGGGGAAGGCTTCACTGATGTCACAAAGTGGAATGAATCAACTCAACAATTTCATATTCGTGTTGGCTATGATGCAGATTTTTTACAGTGTCCTCACCATGGCTTTAGGAAGGGCCAAGATGAGGCGTTGGAAAGCTTGGGAGGAAGAAACTAATACGTTGGATTATCAAGTGGCCAATGATCCAAATCGTTTTAGACTCACAAGGCAAACCACATTCGGACGTCGGCACATCAGTTCCTGTGCAACACCACCATTACTTCTCTGGACTAAATGCTTCTTCAGGCAGTTCTTCCGTTCTGTGGCCAAAGTTGACTACTTGACCCTTCGCCATGGTTTCATCTCGACTCACGTACCTGGAAACACTTCCTTCAACTTCCAAAAGTATATTGAGAGATCATTGCACGATGACTTCAAAGTCGTTGTTGGTATCAGTCCTTTCATGTGGCTCATAGTAGTAATCTTCATTCTGGTAGATGTGCATGGCTGGAATGCATATCTCTGGGTGTCTTTCCTTCCACTCATTATAGTGCTGGCTCTTGGAACAAAACTTGAAGTAATAGTAGCAAGGCTTGCCCTTGAGCTTCAAGACAAGACAGCTGTAGTGAAAGGAGCTCCAATGGTGGAACCAAGTGATGATCTCTTCTGGTTTAATCATCCCAAATTTGTTCTCACCCTTCTTCATTTCACTTTGTTTATGAACGCCTTCGAGTTTTCATTTTTCATCTGGGTTACGCTACAATATGGGATAAAATCTTGCTACCACGATAAGGTGGCAGTCATCGTCATAAGAGTGGTCTTAGCGGTCATAGTCCAAGTGTTGTGCAGCTACATTACTCTACCTCTCTATGCTCTTGTAACACAGATGGGGTCACAATTCAAAGCTGCAGCATTAGAAGAACACACAGCCAAAGCCATAAAGAAATGGCACAAAGATGTGAAGCAAAAGAGAAAGAAGCATCACCATCACCTCGACCTCGACTCGAGCCAGCAACAGGAAGGCTCGTCTCACTCCATCTCCGAGCGCCCGTCTCGAGTTTTCGAGAGCAGCAGCAGAACCTTAAGCTCCGAAGAGATGAGCTCTTCCCACCATAGAGCTCCCACTTTTTCTGAGCTCAACAGTCTTAGTATCATTGAGTGTGATGAGATTGTTGAAGAACCCACAGAAGCTGTGGTAACAAAGAATGAATCTGCAATTTCAACTACCGAAAATGGCAGAAGAGCCGATAGCTCTTCTTCTCCGAAGCCCTTCAAGTTCTCAGCTTACCAGAACCCGGCCTTATCCGCCGCTCTCACCGCCAACAGCGTCCAACCTTCGAAATTCACCTTCCTCTGTATCTTCTCCCTCTCCTCCGCATCTGCATTTGCCTTCCTTCGTATTCTTTCCTGGGAAAATGCGATTGTTGGCAATTTGAAGCTCAAGAACTTTCCTGAAGAGGCAGCCTATTTATTTGCCAAGGCTGCACAGACTGTGGTAGGCTTAATCTTTTTGGGAACGGTATTAGCCTTTTTCAAAGCGATATCCTTGTATAGAAAAAGATTCAGTGGTGTTGTGTCTGTTATATCTGCCACTAAAGGAACCAAGGAACAAACACCACTTTCCAAGCGTCAACTAGGGCTTATGGGATTAAAACCAAAGGTTGACAATGGAACATCTGAAAAGGCTGTAAAGCCTCCAAAATCTAAACCCTACTCATCACCTTCATCTTCTGATGTTCTTGTTCCTCTTCATCAATCAATTGGCAGTTTTAGTTATTCATCTCAAAGAAACATAGATAAATCGAACTCTGCCAGTGGAGGTAAAATGCAGTCTTTTGCAACACCTTCCACATCCCCGGGTTCTGCATCTTCCTTGTATCTTGTCTCTGGAGTGGCCTCACCACTGCCTTCTGCCCAGAGTTCATCAGGGCGGGATTCAGTAGTGTGTACCCCATGGTCAAGCAAGCGAGTATCCTCTCTAAAAGAAATTACATCTGAAGAAGACTTTGAACGATTCCTTACTGAAGTAGATGAAAAGTTAACTGAGTCTGCAGGAAAATTGGCAACTCCACCCCCCACCGTCGGCAGTGTTGGTATAACCAGTCCCAGTACTGTGGCTACTTCAGCTAATACTTCTGGAACTACCAGAAGTACTCCCTTGAGGCCTGTAAGGATGTCACCGAGTTCACAGAAATTCACCACTCCTCCTAAGAAAGTAGAGGGTGATGTTCCCTCCCCAATGTCTATGGAGGAAATGGTTGAAGCTTTCAAGCATTTGGGAGTATATCCTCAAATTGAAGAATGGCGTGATCGTCTCAGGCAATGGTTTTCTTCCACTTTGCTTAATCCTCTAGTCGAAAAGATTCAGACCAGTCATGTTCAGGTAAAAGAAGTGGCCGCCAAACTCGGTGTCTCAATAACTATAAGTCCTGTAGGCGACTCCACAGGATCCCTTCCCTCTGTGTCTTCAGTTGACAGGACTAATGAATGGCAACCAACATTGACCCTTGATGAAGATGGACTCCTCCACCAATTACGAGCAACTCTCATGCAATCTATAGATGCCTCTACAATCAAGATGCCTCTGGCGAATGCAGCACAGTCCCCTCAGCAGAATCCCTTAGTTCCGACCATGCAAGAGTGTGTTGATGCCATTGCAGAGCACCAGAAACTCCTTGCTTTGATGAAGGGTGAATGGGTCAAAGGCTTACTGCCGCAAAGCAGTATTCGAGCAGATTATACAGTACAAAGAATCAAAGAGCTTTCTGAAGGGACGTGCTTGAAGAATTACGAGTATCTTGGAACTGGAGAGGTTTATGATAAGAAGAACAAGAAATGGACACTTGAGCTTCCTACCGATTCTCACTTACTCTTGTATTTATTCTGTGCTTTCCTAGAGCATCCCAAGTGGATGCTACATCTAGATCCTTCAATCTATGCCGGGGCTCAGTCAAGTAAAAATCCTTTGTTCTTGGGGGTTCTTCCTCCAAAAGAGCGCTTTCCTGAGAAGTACATAGCAATTATATATGGCGTTCCTTCCGTTATTCATCCCGGAGCTTGCATACTGGCCGTTGGAAGGAAAAATCCTCCAGTTTTCTCTTTGTATTGGGATAAGAAGCTTCAGTTTTCCCTTCAGAGTCAAGATTGGATATGGCGGAATTATTCGGGGAATGCACCTTGGTTCATCTGCCCTAAGAATCCTTCCAGTTTTGAATCCAGAGCCTGTAGACTGACATTAGATGATTACTTCAATTGGACAGAATCAACAATAGCATCTTTGGATGATTTTGGATCACGGGCAACAAGCACCGAATTGATTGTTGTTGTGACGTGGTCAATCCACTACCTTGAAAGGAAAATTCGACGTGACCTCAATGCTAAATTGCAATTGTCAACTGCTCTCCAAGCGAAGCAGCTGCATAAATGGATTTTCGACCAAGTCGAATGGCTGTTGTGCAAACTTATCTTGGCGGAAGTCCGGAGTCTTAAAGCTTTAGTGGGTAAACTGGAATACTTAGGTGAAGCATCCTTGCAGAATGTCTCGCTTCAAAGAGTTGCTATTGGAGCATGCCCCTCCACTCCAGCAATGGCAGAATCTGCGATGCCCAATTTAATCAAGGTGGGCCTTGAAGAAAGAGCGGCGGAGAGTTCTATTGCAATACGTTCATGCCACCAGGAAGCTAAAGCTGGAGGGGGATATACTTGCCCTCGATACAAAGCACAAGTTTGTGAGCTGCTAACGAAGTATCAATCTGTGGATTCACACTTATCTCCTCACCCCATTTGGCTAGGTCGAATCATCATCTCTGTCCAATTATACTACTTGATGAAGTCTATGATAAAGTAG 4272 44.73 MAAAAVDPSSLQFTSTWAVAAVCFIFISLSLFLEHLIHLLSNWLKRKRKAALFEAVEKLKSVLMLLGFMSLTLTVTQQPVSKICIPNSVAYTMLPCQRELQITANKNLEMEKLRSNQSFSWLPEKIDSSSSSDSSSSSSSSSSSDYCTAKGKASLMSQSGMNQLNNFIFVLAMMQIFYSVLTMALGRAKMRRWKAWEEETNTLDYQVANDPNRFRLTRQTTFGRRHISSCATPPLLLWTKCFFRQFFRSVAKVDYLTLRHGFISTHVPGNTSFNFQKYIERSLHDDFKVVVGISPFMWLIVVIFILVDVHGWNAYLWVSFLPLIIVLALGTKLEVIVARLALELQDKTAVVKGAPMVEPSDDLFWFNHPKFVLTLLHFTLFMNAFEFSFFIWVTLQYGIKSCYHDKVAVIVIRVVLAVIVQVLCSYITLPLYALVTQMGSQFKAAALEEHTAKAIKKWHKDVKQKRKKHHHHLDLDSSQQQEGSSHSISERPSRVFESSSRTLSSEEMSSSHHRAPTFSELNSLSIIECDEIVEEPTEAVVTKNESAISTTENGRRADSSSSPKPFKFSAYQNPALSAALTANSVQPSKFTFLCIFSLSSASAFAFLRILSWENAIVGNLKLKNFPEEAAYLFAKAAQTVVGLIFLGTVLAFFKAISLYRKRFSGVVSVISATKGTKEQTPLSKRQLGLMGLKPKVDNGTSEKAVKPPKSKPYSSPSSSDVLVPLHQSIGSFSYSSQRNIDKSNSASGGKMQSFATPSTSPGSASSLYLVSGVASPLPSAQSSSGRDSVVCTPWSSKRVSSLKEITSEEDFERFLTEVDEKLTESAGKLATPPPTVGSVGITSPSTVATSANTSGTTRSTPLRPVRMSPSSQKFTTPPKKVEGDVPSPMSMEEMVEAFKHLGVYPQIEEWRDRLRQWFSSTLLNPLVEKIQTSHVQVKEVAAKLGVSITISPVGDSTGSLPSVSSVDRTNEWQPTLTLDEDGLLHQLRATLMQSIDASTIKMPLANAAQSPQQNPLVPTMQECVDAIAEHQKLLALMKGEWVKGLLPQSSIRADYTVQRIKELSEGTCLKNYEYLGTGEVYDKKNKKWTLELPTDSHLLLYLFCAFLEHPKWMLHLDPSIYAGAQSSKNPLFLGVLPPKERFPEKYIAIIYGVPSVIHPGACILAVGRKNPPVFSLYWDKKLQFSLQSQDWIWRNYSGNAPWFICPKNPSSFESRACRLTLDDYFNWTESTIASLDDFGSRATSTELIVVVTWSIHYLERKIRRDLNAKLQLSTALQAKQLHKWIFDQVEWLLCKLILAEVRSLKALVGKLEYLGEASLQNVSLQRVAIGACPSTPAMAESAMPNLIKVGLEERAAESSIAIRSCHQEAKAGGGYTCPRYKAQVCELLTKYQSVDSHLSPHPIWLGRIIISVQLYYLMKSMIK 1423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2721679 2742524 + ClG42_03g0023500.10 Clacu03g0235 244800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g0235 1423 PANTHER MLO-LIKE PROTEIN 1 7 514 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Clacu03g0235 1423 MobiDBLite consensus disorder prediction 735 760 - -
Clacu03g0235 1423 MobiDBLite consensus disorder prediction 692 720 - -
Clacu03g0235 1423 MobiDBLite consensus disorder prediction 836 877 - -
Clacu03g0235 1423 MobiDBLite consensus disorder prediction 124 144 - -
Clacu03g0235 1423 Pfam Cytochrome B561, N terminal 567 1194 IPR019176 -
Clacu03g0235 1423 MobiDBLite consensus disorder prediction 538 564 - -
Clacu03g0235 1423 MobiDBLite consensus disorder prediction 478 516 - -
Clacu03g0235 1423 MobiDBLite consensus disorder prediction 542 564 - -
Clacu03g0235 1423 MobiDBLite consensus disorder prediction 824 887 - -
Clacu03g0235 1423 Pfam Mlo family 10 489 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Clacu03g0235 1423 MobiDBLite consensus disorder prediction 469 516 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g0507 Clacu-Chr1:5018159 Clacu03g0235 Clacu-Chr3:2721679 4.00E-18 dispersed
Clacu03g0235 Clacu-Chr3:2721679 Clacu05g2283 Clacu-Chr5:31197283 7.20E-125 dispersed
Clacu03g0233 Clacu-Chr3:2666744 Clacu03g0235 Clacu-Chr3:2721679 9.10E-135 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g0235 - - - 0.0