Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g0256 ATGGCTGTTTCCACGATGCCCATTTATAATAATGGTGGAATGGAGAGTAAAGAATTCTCGAGTTTTGCTCGGCAAGTGGTGGTCGGACGGTGGTTCTTTCTTTTTGCTTCCTTCCTTGTAATGACCGGCGCCGGTGGCTTTTATTTGTTTGCTTATTTCTCCAAACACATTAAAGAAACCCTCCATTGTGACCAAACTAAACTCAACAAGATTGGCTTTTACAAAGACCTTGGATCCAACATCGGCATTATCTCCGGCCTCCTTCCCGAGTTTGCACCACCTTGGTGCCTTCTCCTCCTCTCCTCCGCCCTCAACTTCATCGGCTACTTCAAAATATGGGAAGCCGTCACTGGAAAAATCATGCATCCGACCGTTGAGTACTTTTGCTTTTACATTACAATTGGAGGAAACTCTCACATCCTAGCCAATACAGTAATGCCAGTGACATGCGTGAAGAACTTCCCAGAGAGAAGAGGAGTAATCTTAGGGCTTTTGAAAGGGTTTTTGGGCATAGGTGGGGCTGTACTCACCCAAGTTTACTTTGCTATTTATGATCATACTCATGATACCAAATCTCTCATTCTCTTCATTGCTTGGTTCCCCTCTTTGATTACTCTGCTTTTTGCTTCGCAATCAGAGAAGTCAGAATCGTAA 654 44.04 MAVSTMPIYNNGGMESKEFSSFARQVVVGRWFFLFASFLVMTGAGGFYLFAYFSKHIKETLHCDQTKLNKIGFYKDLGSNIGIISGLLPEFAPPWCLLLLSSALNFIGYFKIWEAVTGKIMHPTVEYFCFYITIGGNSHILANTVMPVTCVKNFPERRGVILGLLKGFLGIGGAVLTQVYFAIYDHTHDTKSLILFIAWFPSLITLLFASQSEKSES 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2971169 2975125 + ClG42_03g0025600.10 Clacu03g0256 244821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g0256 217 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 29 209 - GO:0016020(PANTHER)
Clacu03g0256 217 Pfam Nodulin-like 30 209 IPR010658 -
Clacu03g0256 217 SUPERFAMILY MFS general substrate transporter 18 208 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0256 Clacu-Chr3:2971169 Clacu03g0266 Clacu-Chr3:3026229 1.80E-56 dispersed
Clacu03g0254 Clacu-Chr3:2950844 Clacu03g0256 Clacu-Chr3:2971169 2.30E-78 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g0256 - - - 0.0