Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g0257 ATGGGTTTGCTTTTAATCCCTCTCTTCATCGCCATCAGAGAAGACATTGTTCAATGGAATCTTAACAAAATCACCAAACTAAAGAAATCTCAAACACTCCCTCCTCAAATTTCAATTTCTGCTCCAACGTTAAATCCATCATCCCAAACCAATTCTTTTTTCCAAAACATTTTCAACAAACCCGAAAGAGGAGAAGACTACACAATTCTTCAAGCAATTTTGAGTATTGATATGCTTATTTTATACCTAACAATGATAATTGGGATTGGTTCAAGCTTTACAGCCATGGACAATCTTGGCCAAATCGGTGAATCTCAAGGCTACTCAACTGAATCCATCGATTCCATCATCTCAATCGTTAGCATTTTCAACTTCTCCGGTAGAATCTTTTCTGGGTTTGCTTCAGAAATCTTGCTAGAGAAACTCAAATTCCCTAGACCATTGATGCTCACTTTCACTCTTTTGATCTCTTGTATTGGACATATCTTAGTAGCTTTTCCCTTCCATCAATCTCTTTACATTGCATCAATCATAATGGGGTTTTGTTTGGGTTCTCAAATTCCATTGTATTTCGCTATGATTTCAGAGATTTTTGGTCTCAAACATTACTCCATGTTGTACAATTTCGGCCAACTCTCTTGCCCTGTTGGGACTTGTGTTCTCAATGTATTGGTGGCCGGGAAATTCTACGAGGAGGAAGCGAAGTCGAGTGTTAATTCAACCCAATTTAAATGCGAAGGGGAACTATGTTATAGAAATTCTTTTGCGATTTTGACTGGGATGTCGTTGTTAGGAGCTGCAATTTCATTGATTTTGGTTAGAAGAATGAGCGAGTTTTTACAGAGGAGATATACACAAGAAGTTTAG 867 37.72 MGLLLIPLFIAIREDIVQWNLNKITKLKKSQTLPPQISISAPTLNPSSQTNSFFQNIFNKPERGEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQGYSTESIDSIISIVSIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYIASIIMGFCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYEEEAKSSVNSTQFKCEGELCYRNSFAILTGMSLLGAAISLILVRRMSEFLQRRYTQEV 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2975248 2976114 + ClG42_03g0025700.10 Clacu03g0257 244822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g0257 288 Gene3D MFS general substrate transporter like domains 54 280 IPR036259 -
Clacu03g0257 288 Pfam Major Facilitator Superfamily 82 275 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Clacu03g0257 288 SUPERFAMILY MFS general substrate transporter 59 276 IPR036259 -
Clacu03g0257 288 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 275 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0257 Clacu-Chr3:2975248 Clacu03g0266 Clacu-Chr3:3026229 3.60E-68 dispersed
Clacu03g0254 Clacu-Chr3:2950844 Clacu03g0257 Clacu-Chr3:2975248 1.40E-91 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g0257 - - - 0.0