Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g0263 ATGGCCGACAACTTTCTCCCCGAAACCTGCCGTTTCCTCAAACAACTTGGAGAAGGACGATGGTTTTCAGTATTCGCTTCTTTTCTAATCATGATCGGCGCAGGTTCAACTTACGTTTTCGGAACATACTCCAAAGTATTGAAAACCCAATTCGATTATGATCAAACCCAAATCAACACATTGGGATTTGCCAAAGATCTCGGCTCCAACCTCGGTGTTTTCGCCGGCCTTCTCGGCGAGGTGGCGCCGCCGTGGGTTCTGTTCATCGTCGGTTCATCTCTCAATTTCTACAGCTACTTCATGATTTGGCTCTCCATCACTCGCCGTATCGCCAAACCCAGTTTATGGAAAATGTTCTTCTACATTTCCTTAGCTGCCAATTCACAAAATTTCGCTAATACAGCCGTTTTAGTAACCAGCGTCAGGAATTTCCCTGATCGACGGGGAATTATTCTCGGACTTCTCAAAGGCTTTGTCGGAATCGGAGGTGCCATTTTAACTCAATTCTATTTAGCCATTTACGGCCATGAAAATCCAGCTAGTTTGGTTCTTCTTCTTTCATGGTTGCCCACTTTTGTGTCTTTGGTATTTTGTCTCGTGATTCGAACAATCAATATCCGTAAACATCCTGAAGAACTCAGAGTTCTTTACCATTTGCTTTATGTCTCAGTAATTCTTGCTCTGTTTCTCTTATTTCTAACCATTACCCAAAAACAAGCTGAGTTTTCTTCAGCTGGGTATATAAGTGGAGCTGCCGTCATTGTTGGATTACTATCTATTCCTCTTTTAATCGCCATTAGAGAAGAACTCATTCTCTTCAAACTCAACAAACAAACCAACAAAATTCAACCCACCCCTGTTTTCGTTCCTGAACAAAAACCTTCATCAAATCCCCCACCTACCAACAATGATTCCTTAACCCCACTTGAGGAAATTTCAGAAACTGATTCTCCATCATGTTTCTCAAACATACTCAACAAACCAGAAAGAGGATCAGATTACACCATTTTACAAGCTCTGTTCAGCAAAGACATGGCGCTTGTTTTCGTAGGAACACTTTGTGGGTGTGGTTCATCACTTGCTGCCATTGACAACATAGGCCAAATTGGTGAATCACTTGGCTATCCATCTCAATCCATAAGCATCTTCGTTTCATGGGTTTCTATATTCAATTTCTTCGGCAGAGTGGGGTCTGGCTTCATCTCTGAAACTCTCATGACAAAATACAAATTACCTCGTCCTTTAATGTTCGCTTTCTCCCATCTTCTAACCTGCATTGGCATGCTCTTCATTGCCTTCCCATATTCCGGCTCAATCTACATAGCTTCATTGATCATCGGGTTCGGATTCGGAGCTCAAGTTCCGATGGTTTTCGCCATAATTTCGGAACTTTTCGGTCTGAAATATTACGCAACCATCTTCAATTGTGCACAATTGGCAGTCCCCATTGGATCCTATGTACTAAATGTGGATGTAATTGGGAGATTATATGATATTGAAGCCATAAAAGATGGGGGAATTAAGAATGGGAAAGGACTAACTTGCCATGGAATTCATTGTTTTAGTGGGTCATTCTTGATTTTGGCTGTGGTGGTGTTGATTGGAGCTTTGGCTTCGCTTGTGTTGGCTTTCAGGACGAGAGATTTTTACAGAGGGGATGTTTATAAGAAGTATAAAGAGGATATGTGGATTCCTCAATCGGATATGGAATTTTATTGTTTAGATAACAAGAAGAAAGTTGATAACAATTTGCAGCGGACTGTCATGCCGCCTAAATATAGTTTTCTCAATATAATATAG 1800 41.28 MADNFLPETCRFLKQLGEGRWFSVFASFLIMIGAGSTYVFGTYSKVLKTQFDYDQTQINTLGFAKDLGSNLGVFAGLLGEVAPPWVLFIVGSSLNFYSYFMIWLSITRRIAKPSLWKMFFYISLAANSQNFANTAVLVTSVRNFPDRRGIILGLLKGFVGIGGAILTQFYLAIYGHENPASLVLLLSWLPTFVSLVFCLVIRTINIRKHPEELRVLYHLLYVSVILALFLLFLTITQKQAEFSSAGYISGAAVIVGLLSIPLLIAIREELILFKLNKQTNKIQPTPVFVPEQKPSSNPPPTNNDSLTPLEEISETDSPSCFSNILNKPERGSDYTILQALFSKDMALVFVGTLCGCGSSLAAIDNIGQIGESLGYPSQSISIFVSWVSIFNFFGRVGSGFISETLMTKYKLPRPLMFAFSHLLTCIGMLFIAFPYSGSIYIASLIIGFGFGAQVPMVFAIISELFGLKYYATIFNCAQLAVPIGSYVLNVDVIGRLYDIEAIKDGGIKNGKGLTCHGIHCFSGSFLILAVVVLIGALASLVLAFRTRDFYRGDVYKKYKEDMWIPQSDMEFYCLDNKKKVDNNLQRTVMPPKYSFLNII 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3006421 3008220 - ClG42_03g0026300.10 Clacu03g0263 244828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g0263 599 MobiDBLite consensus disorder prediction 286 308 - -
Clacu03g0263 599 SUPERFAMILY MFS general substrate transporter 21 548 IPR036259 -
Clacu03g0263 599 Pfam Nodulin-like 20 266 IPR010658 -
Clacu03g0263 599 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 19 559 - GO:0016020(PANTHER)
Clacu03g0263 599 Gene3D MFS general substrate transporter like domains 345 587 IPR036259 -
Clacu03g0263 599 Pfam Major Facilitator Superfamily 331 481 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Clacu03g0263 599 CDD MFS_Mch1p_like 19 536 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0261 Clacu-Chr3:2996954 Clacu03g0263 Clacu-Chr3:3006421 1.10E-214 dispersed
Clacu03g0263 Clacu-Chr3:3006421 Clacu03g0265 Clacu-Chr3:3018251 2.30E-205 dispersed
Clacu03g0262 Clacu-Chr3:3001182 Clacu03g0263 Clacu-Chr3:3006421 1.80E-220 tandem
Clacu03g0263 Clacu-Chr3:3006421 Clacu03g0264 Clacu-Chr3:3012351 9.80E-217 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g0263 - - - 0.0