Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g0265 ATGACAATGGATGCAGCACAAAGTTGGCGATTTGTGAAACAAGTTGTCGAAGGACGATGGTTTTCGGTATTCGCCTCCTTTCTCGTCATGATCGGCTGCGGTTCGCCTTACTTGTTTGGAACATACTCCAAAGTTATAAAGACCAAATTTGATTACAATCAAACCCAACTTACCACTTTAGGATTCGCTAAAGATCTCGGTTCCAACCTCGGAGTTGTCGCGGGACTTTTTGCGGAGGTGGCTCCGCCGTGGTTGCTCTTCCTTGTAGGGTTAACCCTCAACTTCTTCAGCTACTTCATGATATGGCTGTCGGTTACTGAGTATGTCCCAAAGCCCCAATTGTGGCTAATGTTCATTTACATTTTCATTTCCGCTAATGCACAAAACTTCCCCAACACTGTGGTTATGGTCACAAATGTAAGAAACTTTGTTGATCAACGAGGCATTATTTTGGGGCTTCTCAAGGGCTTTGTGGGCCTTGGTGGGGCCATTTTAACTCAAATCTATTTTAGCATTTATGGCAATTTAGATCCTATCCATATTGTCTTCCTTCTTTCATGGCTACCTTCCATTGTATATTTCTTGGTTTTTCTTTCAATTCGAACCATCAAAGCTCCTAAGTATCCACAAGAACTCAAAGTCTTCTACTACTTTCTTTACATAGCCATAACAATAGCCCTCTTCATCTTCTTTCTCACCATAACACAACGAAACACCGTCTTCTCTCATACTAACTACGTCGCCGGCGTCGCCATCATCCTCCTCTTAATCTCTCTTCCTCTTTTGATCGCTATTAAAGAAGAGTTTTTTCTCTTCAAACTCAACCAACACACCAAAGATCCTTCGGTTCTGGTTTCAATTCCTGTTAAAAAACTTGAGGAAATTTCAGAAACTTCTTCACCTCGTTTCTCTAATAATAATAATGGATCTAACAAGCCTCGAAGAGGGGAAGATTTTGGTATCTTACAAGCTTTGTTCAGCAAAGACATGGCTCTTATTTTCATATCAACAGTTTCTGCTTGTGGTTCATCTGTTGCTGCCATGGATAATCTTGGCCAAATCGCGGAGTCACTTAACTATCCATCTCAATCCGTAAGTGTGTTCGTTTCATGGATTTCCATTTTCAATTTCTTTGGTCGGGTTTGCTCTGGTTTCGTCTCCGAAGCTGTTTTGACCAAATACAAATTGCCTCGTCCTTTTATCTTTGGCCTTGCCCAAATATTAACTTGCATTGGCCTAATCTCCATTGCTTTCCCTTATAAAAACTCAGTGTATGTAGCTTCATTGATTATTGGGTTTGGGTTTGGAGCTCAAACCCCGTTGCTATTTGCCTTAATCTCTGATCTCTTTGGCCTTAAACATTACTCAACGCTTCTCAATTGTGGGCAATTGGCAGTCCCATTCGGATCTTATCTAATGAATGTGCATGTAGTAGGCAAGTTTTACGATCGAGAAGCCACTAAAATTGGTAATGTGAAGAATGGGAAGGGCCTAACTTGCATTGGAACTCATTGCTTTGGCGAGTCTTTTGGAATTTTGATTGTGGTGACATTGTTTGGAGCGATGGCTTCGTTTGTGTTGGCTTATAGAACTCGAGAATTTTACAAAGGCGATATATATAAGAGATACAGAGATGATCAAATGTGGGTTACTAAGAACGACAATGAACATACAAAGAAAATTGATGACGGAAGCAAACAAGAGAATTTGGTCAACTAA 1719 40.61 MTMDAAQSWRFVKQVVEGRWFSVFASFLVMIGCGSPYLFGTYSKVIKTKFDYNQTQLTTLGFAKDLGSNLGVVAGLFAEVAPPWLLFLVGLTLNFFSYFMIWLSVTEYVPKPQLWLMFIYIFISANAQNFPNTVVMVTNVRNFVDQRGIILGLLKGFVGLGGAILTQIYFSIYGNLDPIHIVFLLSWLPSIVYFLVFLSIRTIKAPKYPQELKVFYYFLYIAITIALFIFFLTITQRNTVFSHTNYVAGVAIILLLISLPLLIAIKEEFFLFKLNQHTKDPSVLVSIPVKKLEEISETSSPRFSNNNNGSNKPRRGEDFGILQALFSKDMALIFISTVSACGSSVAAMDNLGQIAESLNYPSQSVSVFVSWISIFNFFGRVCSGFVSEAVLTKYKLPRPFIFGLAQILTCIGLISIAFPYKNSVYVASLIIGFGFGAQTPLLFALISDLFGLKHYSTLLNCGQLAVPFGSYLMNVHVVGKFYDREATKIGNVKNGKGLTCIGTHCFGESFGILIVVTLFGAMASFVLAYRTREFYKGDIYKRYRDDQMWVTKNDNEHTKKIDDGSKQENLVN 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3018251 3019969 - ClG42_03g0026500.10 Clacu03g0265 244830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g0265 572 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 18 543 - GO:0016020(PANTHER)
Clacu03g0265 572 Pfam Nodulin-like 19 265 IPR010658 -
Clacu03g0265 572 SUPERFAMILY MFS general substrate transporter 20 533 IPR036259 -
Clacu03g0265 572 Gene3D MFS general substrate transporter like domains 329 569 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0263 Clacu-Chr3:3006421 Clacu03g0265 Clacu-Chr3:3018251 2.30E-205 dispersed
Clacu03g0265 Clacu-Chr3:3018251 Clacu05g2320 Clacu-Chr5:31550671 7.60E-142 dispersed
Clacu03g0264 Clacu-Chr3:3012351 Clacu03g0265 Clacu-Chr3:3018251 7.40E-270 tandem
Clacu03g0265 Clacu-Chr3:3018251 Clacu03g0266 Clacu-Chr3:3026229 1.60E-152 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g0265 - - - 0.0