Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g0370 ATGGCGACGACGACCACCAGTATTGGCGGCGGGGGCGGCGGTGGTGGTGGGGAGGATAGAGTTATGGCTACCGCTCAGCAGATAGTCAATAGCCTTAATACTCCTAAGGAGGTTCGAGACGACATGCTTTTGATCTTCTCTAGTTTTGACAATCGTCTTTCTAATATCACCAGTTTGGTCAACAGTGGGGATTCGAAGAAGGAGGAGGATCGATTTGAAGCTGCTGAGAAGGTGATTCTTCGTTGGGATTCTGGTCATGGAGCTTCTCGGAACTCGATTAATTGGGAGGACTCGCCAGATGAGGCGGCTGAGTACTTAACGGCGGTCGATGATATTATTCAGTGGATCGACGACTTGTCAATTCGTTCGGATTCTGCTGAGATCGTCGACCGTGCTGAGAACGCGATCCAGATCGCTATGTCCAGGCTTGAGGATGAGTTTCGTCATTTGTTGATTCGAAGCACCGTCCCTCTCGATGCTGAGCATCTCTACGGTTCAATTCGTAAGGTTTCCCTCTCTTTCGCTTCACACGACAGCGAAAATTCCGATGAATTTGAGTCGTTTGCCGGTGCTGACCGTGGTTCGGGAATCTACCATGAGCGTGGTGTTAGTTTAGGCGATGATTTGCGGGTCGATTTGATTCATCCTGACGCTGTTGTTGATTTGAAAGAGATCGCCGACCGGATGATTCGGTCTGGATACGAGAAAGAGTGTGTTAATGTGTATACTGGTGTCCGACGCGATGCTTTAGATGAGTGCTTGGTGGTTCTTGGACTTGAGAAGCTAAGTATTGAGGATGTTCAGAAAATTGACTGGAAAATCTTGGACGAGAAGATGAAGAAATGGATCCAAGCTGTTAAGGTCAGTGTTCGAGTACTTTTGACTGGCGAGAAGCGACTGTGTGACTATATCTTTAGTGGTTCTGATGACTCTGAGGAAGTTTGCTTCAATGAGACTGCAAAAGGGTGCATCAGACAATTACTAAATTTTGCAGAAGCCATTGCTATAGGGGAAAGGTCAGTGGAGAAGCTATTTCGTATTCTAGATATGTATGAAGCTCTGGAGTACGTTTTCCCTGATTTGCAGGCTATGGTCAGTGATGAATTTGTGATTGAGGAGGCGCAAGGAGTACTTTCTAGGCTGGGAGAGGCCGCCAAAGGTACATTTGCTGAATTTGAGAATGCTGTTCGGAGTGAGACTTCTAAGAAAACAATGTTAAATGCTGAGATTCACCCGCTCACTCGTTATGTCATGAATTACTTAACATTGGTTGTGGTTTATAGTAAGACTCTGGATTCACTTTTAGAAGGCGACGATGAGGATTTGCATCATCTAGGGGGTGATGGTGCTGATAATTTGGAGTTAGAAACTATGTCTCCATTAGCTCGCCGTCTGTTTTCATTGATATCAACACTGGAGACCAATCTAGAGAGAAAATCCAAACTCTATGGTGATGATGCAATACAATATATATTTCTCATGAACAATATACAATATATTGTGCAGAAAGTGAAGGATTCTGAGCTTGGAAAGCTCTTGGGTGACCGCTGGGTTCGTAAACGCCGAGGCCAAGTTCGCATTTATGCAACGAACTATCTTAGGGCATCTTGGGGCAAACTATTGTCTTTCTTGAAGGAAGAAGGTACTGGTGGGAGCTCCAATAGTGCCCTGAAACTAGCTACTTTAAAGGAAAAATTCAAAAATTTCAATGCTGGCTTTGAGGAAATCTATAGAGTTCAGACAGGTTGGAAGGTTCCAGATGCTCAACTACGAGAAGAGCTCCGAATTTCAGTGTCCGCAAAAGCGCTACCTGCATATCGTGCCTTCTTGGGAAGACATGGAGGTCAGTTAGAGAATACAAGACATGCTGGGAGAGATACTGAACCGACTCAATTGACAGCTTTGGTTTTTGACAAGAGAAAGAAGAAAACGGATTTGGGAATTAACAAATCGACAAGCAGGAAATCGCAATTCAGAGCAGCTTCTTAA 1989 44.8 MATTTTSIGGGGGGGGGEDRVMATAQQIVNSLNTPKEVRDDMLLIFSSFDNRLSNITSLVNSGDSKKEEDRFEAAEKVILRWDSGHGASRNSINWEDSPDEAAEYLTAVDDIIQWIDDLSIRSDSAEIVDRAENAIQIAMSRLEDEFRHLLIRSTVPLDAEHLYGSIRKVSLSFASHDSENSDEFESFAGADRGSGIYHERGVSLGDDLRVDLIHPDAVVDLKEIADRMIRSGYEKECVNVYTGVRRDALDECLVVLGLEKLSIEDVQKIDWKILDEKMKKWIQAVKVSVRVLLTGEKRLCDYIFSGSDDSEEVCFNETAKGCIRQLLNFAEAIAIGERSVEKLFRILDMYEALEYVFPDLQAMVSDEFVIEEAQGVLSRLGEAAKGTFAEFENAVRSETSKKTMLNAEIHPLTRYVMNYLTLVVVYSKTLDSLLEGDDEDLHHLGGDGADNLELETMSPLARRLFSLISTLETNLERKSKLYGDDAIQYIFLMNNIQYIVQKVKDSELGKLLGDRWVRKRRGQVRIYATNYLRASWGKLLSFLKEEGTGGSSNSALKLATLKEKFKNFNAGFEEIYRVQTGWKVPDAQLREELRISVSAKALPAYRAFLGRHGGQLENTRHAGRDTEPTQLTALVFDKRKKKTDLGINKSTSRKSQFRAAS 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4145283 4150054 - ClG42_03g0037000.10 Clacu03g0370 244935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g0370 662 MobiDBLite consensus disorder prediction 1 20 - -
Clacu03g0370 662 Pfam Exocyst complex component Exo70 N-terminal 72 152 - -
Clacu03g0370 662 Gene3D Exocyst complex component Exo70 88 640 - -
Clacu03g0370 662 PANTHER EXOCYST COMPLEX PROTEIN EXO70 55 624 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Clacu03g0370 662 Pfam Exo70 exocyst complex subunit C-terminal 280 620 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Clacu03g0370 662 SUPERFAMILY Cullin repeat-like 72 622 IPR016159 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0370 Clacu-Chr3:4145283 Clacu03g1393 Clacu-Chr3:26909507 2.80E-241 dispersed
Clacu03g0370 Clacu-Chr3:4145283 Clacu02g2122 Clacu-Chr2:34369728 2.70E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g0370 K07195 - csv:101212753 1140.56