Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g0466 ATGGGTTCCAAAACACTATTTTTCTTCATCTTCCTTTCCTTTTTGGTCGCTTCTTTCAGGTCTGCTTCTGCACAGGATGAGGAAGACAATGGCCTTGTTATGAATTTTTACAAAGATACATGTCCCCAAGCCGAAGATATCATCAAAGAACAAGTTAGGCTTCTCTACAAGCGCCACAAGAACACTGCATTCTCTTGGCTCAGAAACATCTTCCATGACTGTGCTGTTCAATCCTGTGATGCATCTCTGCTGCTGGATTCAACAAGAAGGACCCTGTCTGAGAAGGAAACAGACAGAAGCTTTGGACTCAGGAATTTCAGGTATATTGAGACCATTAAAGAGGCAGTGGAAAGGGAATGCCCTGGAGTTGTGTCCTGTGCTGATATTCTTGTTTTGTCTGCAAGAGATGGTATTGTTTCTCTTGGGGGGCCTTACATCCCACTTAAAACAGGCAGAAGAGATGGAAGGAAAAGCAGAGCTGATATTTTGGAAGAGTATCTTCCAGACCACAATGAAAGCATGTCTGTTGTCCTTGAAAGATTTGCAGCCATGGGTATTGACACCCCTGGAGTGGTTGCTTTACTAGGAGCTCATAGCGTTGGTAGAACACACTGTGTGAAGCTAGTGCACCGGCTCTACCCACAAGTAGACCCTGTGCTGAACCCTGCCCATGTAGAGCACATGTTGTACAAGTGTCCTGATGAGATCCCAGATCCCAAGGCTGTACAATACGTGAGGAACGACCGTGGTACACCCATGATTCTGGACAACAATTACTACAGAAACATACTTGACAACAAAGGGTTGCTGATAGTGGATCACCAACTAGCTACAGACAAGAGAACAAAGCCATATGTGAAGAAGATGGCCAAAAAGCAAGACTATTTCTTCAAGGAATTCTCAAGAGCCATTACCATACTTTCTGAGAACAACCCTCTCACTGGCACAAAGGGTGAGATCAGGAAGCAGTGCAATGTTGCCAACAAGCTGCACTGA 996 44.88 MGSKTLFFFIFLSFLVASFRSASAQDEEDNGLVMNFYKDTCPQAEDIIKEQVRLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRTLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGIVSLGGPYIPLKTGRRDGRKSRADILEEYLPDHNESMSVVLERFAAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPQVDPVLNPAHVEHMLYKCPDEIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLATDKRTKPYVKKMAKKQDYFFKEFSRAITILSENNPLTGTKGEIRKQCNVANKLH 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5022160 5023623 + ClG42_03g0046600.10 Clacu03g0466 245031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g0466 331 Gene3D Peroxidase, domain 2 168 307 - -
Clacu03g0466 331 FunFam Peroxidase 168 307 - -
Clacu03g0466 331 PANTHER - 14 327 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 ProSiteProfiles Plant heme peroxidase family profile. 31 328 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 CDD secretory_peroxidase 31 326 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Clacu03g0466 331 Gene3D - 35 328 - -
Clacu03g0466 331 Pfam Peroxidase 49 291 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 SUPERFAMILY Heme-dependent peroxidases 32 328 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu03g0466 331 FunFam Peroxidase 35 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0466 Clacu-Chr3:5022160 Clacu04g0934 Clacu-Chr4:23596353 1.50E-81 dispersed
Clacu03g0466 Clacu-Chr3:5022160 Clacu10g2013 Clacu-Chr10:33610508 2.80E-104 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g0466 K00430 - csv:101214168 641.343