Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu03g0742 | ATGACTTCGGGTTCCAGAATGCCCACTTGGAAGGAGAGGGAAAACAACAAGCGTCGTGAGAGGCGCCGTCGTGCAATCGCCGCTAAGATCTTTCTCGGCTTGCGAATGTACGGCAACTACAAGCTCCCCAAGCATTGCGACAATAATGAGGTCCTCAAAGCCCTCTGTGATGAAGCTGGATGGACTGTCGAAGAAGACGGCACTACCTATCGGAAGGGATGCAAACCTGTGGAACGCGATATCATGGGTGGATCAGCTTCTGCGAGTCCATGTTCATCTTACCAGCCAAGCCCACGGGCATCTTATAACCCAAGTCCTGCATCTTCTTCCTTCCCAAGCCCCACATCTTCCCGTTATGCCATTAATGGCAATGACAATGCTACCGATCCCAATTCCCTCATCCCATGGCTGAAGAACCTTTCCTCAGGCTCATCATCAGCTTCCTCCAGGCTGCCTCACCATCTTTTTATTACTTGTGGCTCCATAAGTGCGCCTGTCACCCCTCCATCGAGCTCCCCAACTGCACGAACACCCAGAAAACCAAATGATTGGGACAATCATCCAGCAGTTGCTCCTGCTTGGGCTGCACAGCGCTTCTCATGTTTGCCTGCGTCGACCCCACCGAGCCCTGGGCGTCAGGTGTTGGCTGATCCAGCATGGCTTGATAGTATGCGGATTCCTCAAAGTGGACCATCATCTCCAACCTTCAGCCTTGTGGCAAGGAATCCATTCGGATTTAAGGAGGCAATGTCTGCCGGAGGGTCTCGTAATTGGACTCCTGCACAAAGCGGGACGTGCTCACCCACAGTTGCTGCAGGCACTGATCATACTATAGATGTTCCTATGATGGATGGAACTGCAGCGGAGTTTGCCTTCGGAAGTTGTTCCGTTGGGATAGTGAAGCCTTGGGAAGGAGAGAGAATTCATGAGGAATGCATCTCTGATGATCTCGAACTCACACTTGGAAATTCAAGCACTAGGTGA | 984 | 51.83 | MTSGSRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVEEDGTTYRKGCKPVERDIMGGSASASPCSSYQPSPRASYNPSPASSSFPSPTSSRYAINGNDNATDPNSLIPWLKNLSSGSSSASSRLPHHLFITCGSISAPVTPPSSSPTARTPRKPNDWDNHPAVAPAWAAQRFSCLPASTPPSPGRQVLADPAWLDSMRIPQSGPSSPTFSLVARNPFGFKEAMSAGGSRNWTPAQSGTCSPTVAAGTDHTIDVPMMDGTAAEFAFGSCSVGIVKPWEGERIHEECISDDLELTLGNSSTR | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 8227563 | 8230116 | - | ClG42_03g0074200.10 | Clacu03g0742 | 245307 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu03g0742 | 327 | MobiDBLite | consensus disorder prediction | 84 | 124 | - | - | |
Clacu03g0742 | 327 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Clacu03g0742 | 327 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 1 | 327 | IPR033264 | GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro) | |
Clacu03g0742 | 327 | MobiDBLite | consensus disorder prediction | 165 | 184 | - | - | |
Clacu03g0742 | 327 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 4 | 141 | IPR008540 | - | |
Clacu03g0742 | 327 | MobiDBLite | consensus disorder prediction | 86 | 124 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu03g0742 | Clacu-Chr3:8227563 | Clacu07g1014 | Clacu-Chr7:24570088 | 2.60E-123 | dispersed | |
Clacu03g0742 | Clacu-Chr3:8227563 | Clacu01g1993 | Clacu-Chr1:31866694 | 1.20E-54 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
47410 | PF05687 | BES1_N | 2.80E-66 | No_clan | Clacu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu03g0742 | - | - | - | 0.0 |