Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g0994 ATGTGTATACGATGCAAATCACGGCCCGGAAACGTTTATAGCTACGGTGTCATCTTGCTTGAGATCCTCACTACCAGACTGCCAGTTGATGAGAAGTTTGGTGATGGAGTAGACTTGGTGAAATGGGTGCATAGTGCTCCTTTGAGGGGCGAAACACCTGAACAGATACTCGATTCCCAGCTAGGCACGGTTTCGTTTGGCTGGAGGAAGGAGATGCTTGCAGCTCTCAAGATTGCATTGCTCAGCTCTGACAGCATACCAGCCAAAAGGCCAAAAATGAAGAAGATGGTGGAAATGCTTCTGGAGATCAAGCAAAATTGA 321 47.35 MCIRCKSRPGNVYSYGVILLEILTTRLPVDEKFGDGVDLVKWVHSAPLRGETPEQILDSQLGTVSFGWRKEMLAALKIALLSSDSIPAKRPKMKKMVEMLLEIKQN 106
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15832690 15833010 + ClG42_03g0099400.10 Clacu03g0994 245559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g0994 106 Gene3D Transferase(Phosphotransferase) domain 1 4 106 - -
Clacu03g0994 106 SUPERFAMILY Protein kinase-like (PK-like) 9 103 IPR011009 -
Clacu03g0994 106 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 7 104 IPR051564 GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0994 Clacu-Chr3:15832690 Clacu04g0035 Clacu-Chr4:638668 3.20E-46 dispersed
Clacu03g0994 Clacu-Chr3:15832690 Clacu03g0792 Clacu-Chr3:8907345 8.00E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g0994 - - - 0.0