Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu03g1319 | ATGAAAGCTGTTTTCTTATTAATCAGTCAATTGGCATACCAAAATTCCCCAATAGCCATATCCAAAACATTCATTGTGTTTATATTTATGGCTTTTACTTCTATCATGTTACCCCAATGTTATAACCGCAGAAGAAAACACTCAATCCAGCAACCACCTGATCTCCCACCAGGTCCAAAGCCATTACCTTTTGTTGGCTGCCTCCCAGCAATGTTGTCGAGGAACAACTCCTCACCCCACCAATGGATTCATTCAGTAATGAAACAATTCAACACTGAAATTGCTTCCATACGCCTTGGGAATACTTACATAATCCCCATCACTTCTCCACAACTCGCTCTTCAATTTTTCAAGACACATGATTCTGTCTTTGCATCACGTTCCTCAACTTCTAACGCTGTTGATATCTTAAGCCGTGGATATATCTCCACGATATTCACACCATTGGGAGACCAATGGAAGAAGATGAGAAGAATTCTCTCATCAGAAGTACTCAATCCATCAACTCTCCACCGAATGCTTGGCCAAAGAAACGCTGAAGCTGATTCTCTTTTACACTATATTTTCACCCAAACCAGTAGTAATGGAGGAGGTGCGGTGATTAACGTTAGAAGCATAGCACAACATTATTGCGGTAACATTATTCGAAGAATGCTATTCAACAGAAGATATTATGGCAAAGGGAAGGAAGATGGGGGGCCAACTTTTCAAGAAGAAGAACATAATCAAGCATTGTTGACCATTCTTAGACATGTTAATGCATTTTCTATATCAGATTTCATGCCCTATTTGAAGCCTTTTGATTTAGATGGACATCAAAAAATTATGAAGAATGCTTTGAATGTCCTTCGAAAGTACGACGACCCTATCATAGATGAGAGAATGCAACAATGGAAGAAAGGTGAGAAAATAGATGGGGTGGAGGACATTCTTGATATCCTCATTTCGCTTAAAAATGAGAATGCAAATTTATTGTTGTCAATTGAAGAGATCAAGGCTCAAATCACAGACTTACAAATTGCAACGATAGATAATCTTTCAAATGCAGTAGAATGGGCAATGGCAGAATTACTCAACCAACCAAAAATTCTCAAAAAAGCTGTTGAAAAATTGGATGAAGTAGTTGGAAGAGAAAGGTTGGTTCAAGAATCTGATATCCCAAAACTCAAGTATCTCACAGCTTGTGCTAGAGAATCTTTTCAATTTCATCCATTTTCACCCTTCAACGTTCCTCACGTTTCCACCTCTAACACCATTGTGGCCGGTTACTTTATTCCCAAAGGAAGTGAAGTGTTGCTCAGTCGTTTAGGTCTTGGTCGAAATCCAAGGATTTGGGAGAATCCAATGAGATTTGATCCAGAACGTCATTTAAAAGATGGGACAATTGAATTGGGGATTTCAGAACCCAATTTACGATTCATCACTTTCACTAGAGGGAGGAGAGGCTGTGCTGGTAGCTCACTGGGAACTAACATTACCATGATGTTATTTGCTAGACTTCTACAAGGGTTTTCATGGAGTTTAATACCAAGAATCACGAAGATAGACCTTTCTGATACTGATGATCTTTCTCTCTCGAAGCCGTTACATTTACTTGCAGAACCACGTTTATCTTATAGTATGTACCCAAGGCTTTCTTGA | 1641 | 39.06 | MKAVFLLISQLAYQNSPIAISKTFIVFIFMAFTSIMLPQCYNRRRKHSIQQPPDLPPGPKPLPFVGCLPAMLSRNNSSPHQWIHSVMKQFNTEIASIRLGNTYIIPITSPQLALQFFKTHDSVFASRSSTSNAVDILSRGYISTIFTPLGDQWKKMRRILSSEVLNPSTLHRMLGQRNAEADSLLHYIFTQTSSNGGGAVINVRSIAQHYCGNIIRRMLFNRRYYGKGKEDGGPTFQEEEHNQALLTILRHVNAFSISDFMPYLKPFDLDGHQKIMKNALNVLRKYDDPIIDERMQQWKKGEKIDGVEDILDILISLKNENANLLLSIEEIKAQITDLQIATIDNLSNAVEWAMAELLNQPKILKKAVEKLDEVVGRERLVQESDIPKLKYLTACARESFQFHPFSPFNVPHVSTSNTIVAGYFIPKGSEVLLSRLGLGRNPRIWENPMRFDPERHLKDGTIELGISEPNLRFITFTRGRRGCAGSSLGTNITMMLFARLLQGFSWSLIPRITKIDLSDTDDLSLSKPLHLLAEPRLSYSMYPRLS | 546 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 25627808 | 25629866 | + | ClG42_03g0131900.10 | Clacu03g1319 | 245884 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu03g1319 | 546 | PANTHER | CYTOCHROME P450 703A2-RELATED-RELATED | 28 | 540 | IPR051382 | - | |
| Clacu03g1319 | 546 | Coils | Coil | 314 | 334 | - | - | |
| Clacu03g1319 | 546 | PRINTS | E-class P450 group I signature | 473 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1319 | 546 | PRINTS | E-class P450 group I signature | 330 | 347 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1319 | 546 | PRINTS | E-class P450 group I signature | 434 | 458 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1319 | 546 | PRINTS | E-class P450 group I signature | 210 | 228 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1319 | 546 | PRINTS | E-class P450 group I signature | 350 | 376 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1319 | 546 | PRINTS | E-class P450 group I signature | 483 | 506 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1319 | 546 | PRINTS | E-class P450 group I signature | 393 | 411 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1319 | 546 | Pfam | Cytochrome P450 | 56 | 526 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1319 | 546 | SUPERFAMILY | Cytochrome P450 | 56 | 536 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1319 | 546 | Gene3D | Cytochrome P450 | 49 | 539 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu03g1319 | Clacu-Chr3:25627808 | Clacu03g1321 | Clacu-Chr3:25660728 | 7.70E-269 | dispersed | |
| Clacu03g1318 | Clacu-Chr3:25620403 | Clacu03g1319 | Clacu-Chr3:25627808 | 9.10E-200 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu03g1319 | - | - | - | 0.0 |