Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g1321 ATGGAAGCTGCTTTCTTATTCATTAGTCAATTGGCACACCATTATTCACCAATAGCCATATCCAAAACTTTCATTGTGTTTGTATTTGTGGCTTTCATTTCTGTCATGTTTTCCCAATGTTATAACCTCAAAAGAAAACACTTAAGCCGACAACAAGCACCTCTTCCACCAGGCCCAAAGCCATGGCCTATTGTTGGGTGCCTCCCATCAATGTTGTTGAGGAAAAATTCTCCAACACACCAATGGATTCATTCAGTAATGAAGCAATTCAACACTGAAATTGCCTCCATACGCCTTGGAAACACTTACATAATCCCTATCACTTCCCCACAACTCGCTCTTCAATTTCTTAAGACCTATGATTCTGTCTTTGCATCACGTTCTTCCATTTCCAACACTGTTCATATCTTAAGTCGTGGATATCTCACCACAGCATTTTCGTCTTTGGGAGACCAATGGAAGAAGATGAGAAGAATTCTCTCATCAGAAGTACTCAATCCATCAACTCTCCACCGAATGCTTGGCCAAAGAAACGCTGAAGCTGATTCTCTTTTACACTATATTTTCACCCAAACCAGTAGTAATGGAGGAGGTGCGGTGATTAACGTTAGAAGCATAGCACAACATTATTGCGGTAACATTATTCGAAGAATGCTATTCAACAGAAGATATTATGGCAAAGGGAAGGAAGATGGGGGGCCAACTTTTCAAGAAGAAGAACATAATCAAGCATTGTTGACCATTCTTAGACATGTTAATGCATTTTCTATATCAGATTTCATGCCCTATTTGAAGCCTTTTGATTTAGATGGACATCAAAAAATTATGAAGAATGCTTTGAATGTCCTTAGAAAGTATGACGACCCTATCATAGATGAGAGAGTGCAACAATGGAAGAAAGGTGAGAAAATAGATGGGGTAGAGGACATTCTTGATATTCTCCTTTCACTTAAAGATGAGAATGCAAATTCATTATTGTCAATCGAAGAGATCAAGGCTCAAATCACAGAGTTACAAATTGCGACAGTAGATAATCCATCGAATGCAGTGGAATGGGCAATGGCAGAACTAATCAATCAACCAAAAGTTCTCAAGAAAGCCGTTGAAGAATTGGACGAAGTAGTTGGAAAAGAAAGGCTAGTTCAAGAATCTGATATCCCAAAACTCAAGTATCTCACCGCTTGTATTAGAGAATCTTTTCGACTTCATCCATTTTCACCTTTCAATATTCCTCATGTCTCAAACTCTGACATCATTGTGAATGGTTACTTAATTCCCAAAGGTAGTGAAGTTTTGCTAAGTCGTTTAGGTCTTGGCCGAAACTCAAGAATTTGGGAAAATCCAAACAGATTTAATCCAAAACGTCACCTAAAAGATGAGACAGTTGAATTGGGATTATCAGAACCTAGTCTACGATTCATCACCTTTACTAGAGGGAGGAGAGGCTGCATTGGTAGTTCACTTGGCACTAACATTACCATGATGATATTTGCTAGACTTCTACAAGGATTTTCATGGAGCTTACCGTCAGGAATTAAAAAAATTGACTTCTCAAAAACTGATCATGAACTCTCCCTCATGAAACCATTACAGCTACATGCAAGGTCACGTCTCTCTCATAGTATGTACCCTAAGGTTATTGATCATGAACCATAA 1656 38.59 MEAAFLFISQLAHHYSPIAISKTFIVFVFVAFISVMFSQCYNLKRKHLSRQQAPLPPGPKPWPIVGCLPSMLLRKNSPTHQWIHSVMKQFNTEIASIRLGNTYIIPITSPQLALQFLKTYDSVFASRSSISNTVHILSRGYLTTAFSSLGDQWKKMRRILSSEVLNPSTLHRMLGQRNAEADSLLHYIFTQTSSNGGGAVINVRSIAQHYCGNIIRRMLFNRRYYGKGKEDGGPTFQEEEHNQALLTILRHVNAFSISDFMPYLKPFDLDGHQKIMKNALNVLRKYDDPIIDERVQQWKKGEKIDGVEDILDILLSLKDENANSLLSIEEIKAQITELQIATVDNPSNAVEWAMAELINQPKVLKKAVEELDEVVGKERLVQESDIPKLKYLTACIRESFRLHPFSPFNIPHVSNSDIIVNGYLIPKGSEVLLSRLGLGRNSRIWENPNRFNPKRHLKDETVELGLSEPSLRFITFTRGRRGCIGSSLGTNITMMIFARLLQGFSWSLPSGIKKIDFSKTDHELSLMKPLQLHARSRLSHSMYPKVIDHEP 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 25660728 25662815 + ClG42_03g0132100.10 Clacu03g1321 245886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g1321 551 SUPERFAMILY Cytochrome P450 56 537 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g1321 551 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g1321 551 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g1321 551 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g1321 551 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g1321 551 PRINTS E-class P450 group I signature 434 458 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g1321 551 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g1321 551 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 28 541 IPR051382 -
Clacu03g1321 551 Pfam Cytochrome P450 56 524 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g1321 551 Gene3D Cytochrome P450 48 543 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g1319 Clacu-Chr3:25627808 Clacu03g1321 Clacu-Chr3:25660728 7.70E-269 dispersed
Clacu03g1321 Clacu-Chr3:25660728 Clacu03g1325 Clacu-Chr3:25756070 2.10E-245 dispersed
Clacu03g1321 Clacu-Chr3:25660728 Clacu03g1323 Clacu-Chr3:25691781 2.80E-218 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g1321 - - - 0.0