Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g1323 ATGAAGCAATTCAATACTGAAATTGCTTTCATACGCCTTGGAAATACTTACATAATTCCCGTGACTTCTCCAGAACTAGCTCTTGAATTTCTTAAGACATATGATTCTATCTTTGCATCACGTTCCTCCATTTCCAACACTGTTCATATCTTAAGCAATGGATATGTCACCACAGTTTTTGCATCGATAGGAGACCAATGGAAGAAGATGAGAAGAATTCTTGCATCACAAATACTCAATCCTTCAACTCTTCATCGATTGCTTGGTCATAGAATCGCCGAGGCCGATACTCTTTTACGCTATATTTTCACCCAAACGCGTGATAATGGAGGAGGTGCAACCATAAATGTTAGAAGTATAACACAACATTATTGTGGTAACATTATTAGAAGAATGCTATTCAACAGAAGGTACTATGGCAAAGGGACGGAAGATGGAGGACCAACTTTTGAAGAAGAAGAGCACAATCAAGCATTGTTAACAATTCTTACATATGTTCATGCATTTTCTATATCAGATTTCATACCTTGTTTGAAGCCTTTGGATTTAGATGGACATGAAAAAATTATGAACAAGGCTTTGAATGTCCTCCGAAAGTATTACGAACCCATTATTGATGAGAGAGTACAAAGATGGAAATCAGATGAGAAAATGGAAGGGGTGACGGACGACATTCTTGATATCCTCATTTCACTTAAAGATGAGAATAAAAAATCATTATTGTCAGTCGAAGAGATTAAGGCTCAAATCACGGAGTTACAAATTGCAACAATAGATAATCCTTCAAATGCAGTGGAATGGGCTATGGCAGAGTTGATCAATAAACCAAAAATTCTTGAAAAAGCCGTTGAGGAATTAGACAAAGTAGTTGGAAGAGAAAGGTTAGTTCAAGAATCTGATATCCCAAAACTCAAATATCTCACAGCTTGTGCTAGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAACGTTCCTCACATTTCCACCTCTGACACCATTGTGGCCGGTTACTTTATTCCCAAAGGAAGTGAAGTGTTGCTCAGTCGTTTAGGTCTTGGTCAAAACCCAAGGATTTGGGAGGATCCAATGACATTTGATCCAGAACGTCATCTAAAAGATGGGTCAATTGAATTGGGAATTTCAGAACCTGATCTACGATTCATCACCTTTACTAGAGGGAGAAGAAGTTGCATTGGTAGCTCACTTGGGACTAACATTACAATGATGCTATTTGCTAGACTTCTACAAGGGTTTTCATGGAGCTTATTGCCAGGAGTCACAAAGATAGACTTCTCTGAAACAGATGAACGCACTCTCCCAAAGCCATTGCATCTGCATGCAGAACCACGCTTATCTTATATTATGTATCCAACTTATTGA 1383 38.25 MKQFNTEIAFIRLGNTYIIPVTSPELALEFLKTYDSIFASRSSISNTVHILSNGYVTTVFASIGDQWKKMRRILASQILNPSTLHRLLGHRIAEADTLLRYIFTQTRDNGGGATINVRSITQHYCGNIIRRMLFNRRYYGKGTEDGGPTFEEEEHNQALLTILTYVHAFSISDFIPCLKPLDLDGHEKIMNKALNVLRKYYEPIIDERVQRWKSDEKMEGVTDDILDILISLKDENKKSLLSVEEIKAQITELQIATIDNPSNAVEWAMAELINKPKILEKAVEELDKVVGRERLVQESDIPKLKYLTACARESFRLHPFSPFNVPHISTSDTIVAGYFIPKGSEVLLSRLGLGQNPRIWEDPMTFDPERHLKDGSIELGISEPDLRFITFTRGRRSCIGSSLGTNITMMLFARLLQGFSWSLLPGVTKIDFSETDERTLPKPLHLHAEPRLSYIMYPTY 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 25691781 25693282 + ClG42_03g0132300.10 Clacu03g1323 245888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g1323 460 Gene3D Cytochrome P450 1 454 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g1323 460 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 7 453 IPR051382 -
Clacu03g1323 460 SUPERFAMILY Cytochrome P450 7 451 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g1323 460 Pfam Cytochrome P450 7 442 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g1323 460 PRINTS E-class P450 group I signature 388 398 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g1323 460 PRINTS E-class P450 group I signature 349 373 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g1323 460 PRINTS E-class P450 group I signature 398 421 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g1323 460 PRINTS E-class P450 group I signature 308 326 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g1323 460 PRINTS E-class P450 group I signature 265 291 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu03g1323 460 PRINTS E-class P450 group I signature 124 142 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g1323 Clacu-Chr3:25691781 Clacu03g1328 Clacu-Chr3:25794890 5.60E-204 dispersed
Clacu03g1321 Clacu-Chr3:25660728 Clacu03g1323 Clacu-Chr3:25691781 2.80E-218 proximal
Clacu03g1323 Clacu-Chr3:25691781 Clacu03g1325 Clacu-Chr3:25756070 4.90E-200 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g1323 - - - 0.0