Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu03g1325 | ATGGAAGTTGCTTTCTTATTCTTTAGTCAATTGGCACACCAAAACTCTTCAATAGCCATATCCGAAACTTTCATTGTGTTTGTATTTATGGCTTTCATTTCTATCATATTTTTCCAATGTTATAACCTCCAAAGAAAACACTCAGTCGGACGACAACCACCTCTCCCACCAGGCCCAAAGCCATGGCCACTCCTAGGTTGCCTCCCAACATTGTTAACCAACAAAACCCCAGCACACCAATGGATTCATTCAGTAATGAAGCAATTCAACACTGAAATAGCTTCCATACGCCTTGGAAATACTTACATAATCCCTGTCACTTCTCCACAACTCGCTCTTCAATTTCTTAAGACCTATGATTCTGTCTTTGCATCACGTTTCTCTATTTCTAACGCTGTTGATATCTTAACCCGTGGATATCTCACCACAGCATTTTCACCGATGGGAGAGCAATGGAAGAAGATGAGAAGAATTATGGCATCACAAGTACTTAATCCGACCACACTTCATCGAATGATTGGCCAAAGAACCGCCGAAGCTGATATTCTTTTACGCTATATTTTCACCCAAACTAGTAATAATAGAGGAGGTGCATTGATTAATATTAGAAGCATAACACAACATTATTGTGGTAATATTATCAGAAGAATGCTTTTCAACAAAAGGTATTATGGTAAAGGGAGGGAAGATGGGGGGCCAACTTTTGAAGAAGAAGACCATAATCAAGCATTGTTGACCATTGTTAGGCATGTTAATGCATTTTCTATATCAGATTTCATACCTTGTTTGAAGCTTTTTGATTTAGATGGACATGAAAAAATTGTGAAGAAGGCTTTGAGTGTCATTCAAAAATATGATGAGCCCATTGTAGATGAGAGAGTGCAAGAATGGAAGAAATATGAGAAAAAAGAAGGGATAGAGTACATTCTTGATATCCTCATTTCACTTCAAGATGAGAATGGAAAATCGTTGTTGTCAGTCGAAGAGATTAAAGCTCAAATTGCGGAGCTACAAATTGCAACGATAGATAATCCTTCAAATGCAGTGAAATGGGCAATGGCAGAAATGATGAATCAACCAAAAATTTTCCAGAAAGCCGTTGAAGAACTGGACGAAGTAGTTGGAAGAGAAAGGCTAGTTCAAGAATCAGATATCCCAAAACTCAAGTATCTCACTGCTTGCATTAGAGAATCTTTTCGACTTCATCAATTTTCACCTTTCAATATTCCTCATGTTTCAAACTCTGACATTATTGTGGATGGTTACTTTATTCCCAAAGGTAGTCAAGTCTTACTTAGTCGTCCAGGTCTTGGTCGAAATCCAAGAATTTGGGAGGATCCAATCAACTTTAATCCAGAACGTCATTTAAAAGATGAGACAATTGAATTGGGAGTATCAGAACCAAGTCTTCAATTTATCACCTTCACTAGAGGGAGGAGAGGTTGCATTGGTAGCTTATTAGGCACTAATATTACCATGATGCTATTTGCTAGACTTTTACAAGGATTTTCATGGAGCTTAAGATAA | 1527 | 37.72 | MEVAFLFFSQLAHQNSSIAISETFIVFVFMAFISIIFFQCYNLQRKHSVGRQPPLPPGPKPWPLLGCLPTLLTNKTPAHQWIHSVMKQFNTEIASIRLGNTYIIPVTSPQLALQFLKTYDSVFASRFSISNAVDILTRGYLTTAFSPMGEQWKKMRRIMASQVLNPTTLHRMIGQRTAEADILLRYIFTQTSNNRGGALINIRSITQHYCGNIIRRMLFNKRYYGKGREDGGPTFEEEDHNQALLTIVRHVNAFSISDFIPCLKLFDLDGHEKIVKKALSVIQKYDEPIVDERVQEWKKYEKKEGIEYILDILISLQDENGKSLLSVEEIKAQIAELQIATIDNPSNAVKWAMAEMMNQPKIFQKAVEELDEVVGRERLVQESDIPKLKYLTACIRESFRLHQFSPFNIPHVSNSDIIVDGYFIPKGSQVLLSRPGLGRNPRIWEDPINFNPERHLKDETIELGVSEPSLQFITFTRGRRGCIGSLLGTNITMMLFARLLQGFSWSLR | 508 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 25756070 | 25761218 | + | ClG42_03g0132500.10 | Clacu03g1325 | 245890 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu03g1325 | 508 | Gene3D | Cytochrome P450 | 50 | 508 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1325 | 508 | PANTHER | CYTOCHROME P450 703A2-RELATED-RELATED | 26 | 507 | IPR051382 | - | |
| Clacu03g1325 | 508 | Pfam | Cytochrome P450 | 56 | 507 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1325 | 508 | SUPERFAMILY | Cytochrome P450 | 56 | 507 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1325 | 508 | PRINTS | E-class P450 group I signature | 116 | 135 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1325 | 508 | PRINTS | E-class P450 group I signature | 392 | 410 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1325 | 508 | PRINTS | E-class P450 group I signature | 482 | 505 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1325 | 508 | PRINTS | E-class P450 group I signature | 349 | 375 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1325 | 508 | PRINTS | E-class P450 group I signature | 433 | 457 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1325 | 508 | PRINTS | E-class P450 group I signature | 472 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu03g1321 | Clacu-Chr3:25660728 | Clacu03g1325 | Clacu-Chr3:25756070 | 2.10E-245 | dispersed | |
| Clacu03g1325 | Clacu-Chr3:25756070 | Clacu03g1328 | Clacu-Chr3:25794890 | 6.00E-207 | dispersed | |
| Clacu03g1323 | Clacu-Chr3:25691781 | Clacu03g1325 | Clacu-Chr3:25756070 | 4.90E-200 | proximal | |
| Clacu03g1325 | Clacu-Chr3:25756070 | Clacu03g1327 | Clacu-Chr3:25768719 | 1.60E-204 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu03g1325 | - | - | - | 0.0 |