Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu03g1327 | ATGAAAGCTTCCTTATTCATTAGTCAATTGGCTGATGCATATCAAAATTGTGCAAAAGCAGCCATAGCCAAAACCTTCATTTCTATCGTTTTATTCATATCTTCCATTACTATTTATGTTATTAAGTTCTCTCAATATTACCGCAAAAGAAAGTCCTTAGTCCGGCGGCTACCACCAGGCCCAAAGCCATGGCCCCTCCTCGGCTGTCTTCCAGCAATGTTGAGGAACAAAAACTTGGCAATACACCAATGGATTCATGAAATAATGAAGCAATTCAACACTGAAATTGCTTGCATCCGTCTCGGATCAAATACCCACATAATTCCTGTGGCTTCTCCAGAACTCGCTCTTGAGTTTTTAAAGACACACGATTCTGTTTTTGGATCACGACCCACTTCCATGACTGCGGAGATGTTGAGCCGTGGATATCTAAGTGCAGTTCTTTCACCCACGGGGGATCAATGGAAGAAGATGAGAAGGATCCTGGTTTCTCAAGTACTCAATCCTTCGACCCTCCATGGAATGCTTGGCCAAAGAACAAAGGAAGCTGATACTCTTCTACATTACATTTTCAGCCTCAGCAAAAATGGTGAAGCGGTCAACATAAGAAGCATTGCACAACATTATTGCAGTGGCATTATTAGAAGAATGGTATTCAATAGAAGATACTATGGAAAAGGGAGGGAAGATGGAGGAGCATCTTTTGAAGAAGAGAACCATAATCAAGCATTGTTTACAATTCTAACGCATCTTAATGCATTTTCCATATCAGAATTTATGCCTTGCTTGAAGCCATTCGATCTGAATGGACACAAGAAGATAGTAAAAAGGGCTTTGAAAGTCATAAGAGATCTTGACGAACCCATAATAGAGGAAAGAGTGAAAGAATGGAGAGATGGGAAGAAAAAGGAGGTGGAGGACATCCTTGATATTCTTATCTCCCTCAAAAATGAGAATGGTAAATCATTGTTGTCAATAGAAGAGATTAAGGCTCAAGTCACGGAGTTGCAACTTGCAACCATAGATAATCCTTCAAACGCAGTGGAATGGGCAATGGCAGAGTTACTCAATCAACCAAAAATTCTAGAAAACGCTATTGAAGAATTGGACCAAGTGGTTGGAAGAGATAGGCTGGTTCAAGAATCAGATATACCTAATCTCAAGTATCTCACAGCTTGTATTAGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAATGTTCCTCATGTTTCCAACGATGACATTGTTGTGGCTGGCTACTTCATCCCTAAAGGTAGCCAAGCTTTGTTATGTCGTTTGGGTCTCGGTCGAAACCCAAGGATTTGGAAGGATCCATTGAGATTTGATCCAGAACGTCATTTAAAAGATGGAACAGTTGAATTAGGAATTTCAGAACCTAGTCTTCGATTCATCACCTTCACTAGAGGAAGGAGGGGTTGCATTGGTTCCTCACTTGGCACTAACATTACTATGATGTTATTTGCTAGACTTCTGCAAGGATTTTCATGGAGCTTATTGTCAGGAATCACAAAGGTAGACTTCTCTAAAACTCAAGAACTTTCTCTACTAGAACCCTTGCATTTGCATGCAGAACCACGTCTATCTCATAGTATGTACCCAAGGATTACTTTTGTCAACTAG | 1644 | 40.33 | MKASLFISQLADAYQNCAKAAIAKTFISIVLFISSITIYVIKFSQYYRKRKSLVRRLPPGPKPWPLLGCLPAMLRNKNLAIHQWIHEIMKQFNTEIACIRLGSNTHIIPVASPELALEFLKTHDSVFGSRPTSMTAEMLSRGYLSAVLSPTGDQWKKMRRILVSQVLNPSTLHGMLGQRTKEADTLLHYIFSLSKNGEAVNIRSIAQHYCSGIIRRMVFNRRYYGKGREDGGASFEEENHNQALFTILTHLNAFSISEFMPCLKPFDLNGHKKIVKRALKVIRDLDEPIIEERVKEWRDGKKKEVEDILDILISLKNENGKSLLSIEEIKAQVTELQLATIDNPSNAVEWAMAELLNQPKILENAIEELDQVVGRDRLVQESDIPNLKYLTACIRESFRLHPFSPFNVPHVSNDDIVVAGYFIPKGSQALLCRLGLGRNPRIWKDPLRFDPERHLKDGTVELGISEPSLRFITFTRGRRGCIGSSLGTNITMMLFARLLQGFSWSLLSGITKVDFSKTQELSLLEPLHLHAEPRLSHSMYPRITFVN | 547 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 25768719 | 25771029 | - | ClG42_03g0132700.10 | Clacu03g1327 | 245892 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu03g1327 | 547 | PRINTS | E-class P450 group I signature | 432 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1327 | 547 | PRINTS | E-class P450 group I signature | 481 | 504 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1327 | 547 | PRINTS | E-class P450 group I signature | 348 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1327 | 547 | PRINTS | E-class P450 group I signature | 471 | 481 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1327 | 547 | PRINTS | E-class P450 group I signature | 209 | 227 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1327 | 547 | PRINTS | E-class P450 group I signature | 115 | 136 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1327 | 547 | PRINTS | E-class P450 group I signature | 391 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1327 | 547 | PANTHER | CYTOCHROME P450 703A2-RELATED-RELATED | 34 | 539 | IPR051382 | - | |
| Clacu03g1327 | 547 | Gene3D | Cytochrome P450 | 42 | 532 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1327 | 547 | Pfam | Cytochrome P450 | 58 | 526 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1327 | 547 | SUPERFAMILY | Cytochrome P450 | 58 | 534 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu03g1104 | Clacu-Chr3:20608765 | Clacu03g1327 | Clacu-Chr3:25768719 | 1.90E-238 | dispersed | |
| Clacu03g1316 | Clacu-Chr3:25594494 | Clacu03g1327 | Clacu-Chr3:25768719 | 3.50E-121 | dispersed | |
| Clacu03g1317 | Clacu-Chr3:25595722 | Clacu03g1327 | Clacu-Chr3:25768719 | 1.90E-66 | dispersed | |
| Clacu03g1318 | Clacu-Chr3:25620403 | Clacu03g1327 | Clacu-Chr3:25768719 | 6.70E-235 | dispersed | |
| Clacu03g1327 | Clacu-Chr3:25768719 | Clacu05g0085 | Clacu-Chr5:1006069 | 1.50E-67 | dispersed | |
| Clacu03g1325 | Clacu-Chr3:25756070 | Clacu03g1327 | Clacu-Chr3:25768719 | 1.60E-204 | proximal | |
| Clacu03g1327 | Clacu-Chr3:25768719 | Clacu03g1328 | Clacu-Chr3:25794890 | 3.10E-254 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu03g1327 | - | - | - | 0.0 |