Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu03g1328 | ATGAAAGCTTTGTTATTGATCATTCAATCATCATATCACAACTCTGTAAAAGCAACCATAGCTATAACCTTCATTGCTATCATTTTATTCATATCTTCCATTATTTATGTTTTTAAGTTTTCTCAACATAACCCCAAAAGAAAGCCCTTAGTACGGCGGCTGCCACCGGGCCCAAAGCCATGGCCTCTCCTCGGCTGCCTTCCAGCAATGTTGTGGAACAAAAACTCGCCAACTCACCTATGGATTCATGAAATAATGAAGCAATTCAACACTGAAATTGCATGTATCCGTCTGGGATCAAATACCCACATAATTCCTGTAACTTCCCCAGAACTCGCTCTTGAATTTCTAAAGACACATGATGTTGTCTTCGGATCACGACCCATTTCAATGACTGCTGAGATATTGAGTCGCGGATATCTCAGTACAGTTCTTTCACCCATGGGAGATCAATGGAGGAAGATGAGAAGGATACTTGTTTCTCAAGTACTCAATCCTTCGACCCTCCATGGAATGCTTGGCCAAAGAACAAAGGAAGCTGATACTCTTCTTCGCTACATTTTCATCCTCACAAGAAACGGAGAAGCCATTGACATAAGAAGCATTACACGACATTATTGCGGTAACATTAGTAGAAGAATGATGTTTAATAGAAGATACTATGGAAAAGGGAGGGAAGATGGAGGACCAACTTTTGAAGAAGAAGACCATACTCAAGCATTGTTTACCATTCTTCGGCATGTTCATGCATTTTCTATATCAGATTTCATACCTTTTTTGAAGCCATTGGATTTGGATGGACATGGGAAGATTCTAAAAGATGCTTTGAATTCCATACAAAGGTATGATGATCCCATTATAGAGGAACGAGTGCAACAATGGAAAGATGGGAAGAAGAAGAAGAAGGTCGAGGTAGATGACATTCTTGATATCCTTCTCTCACTTAAAGATGAGAATGGAAAATCATTGTTGTCAATCCATGAGATTAAGGCCCAAATCATAGAGCTACAAATTGCAACAATAGATAATCCTTCAAATGCAGTGGAATGGACAATGGCAGAGTTACTCAATCAACAAAAATTTCTCCAAAAAGCTATTGAAGAATTGGACGAAGTAGTTGGAAGAGAAAGGTTGGTTCAAGAATCAGATATCCCAAAACTCAAGTATCTCACAGCTTGTGTAAGGGAATCTTTTCGTCTTCATCCATATTCATCCTTCAATGTTCCTCACGTTTCCAACTCTGACATTGTCGTAGCTGGCTACTTTATCCCAAAAGGTAGCCAAGTTTTGCTATCTCGTCTAGGTCTTGGGCGAAATCCAAGGATTTGGGAGGATCCATTAAGATTTGATCCAGAACGTCATCTAAAAGATGGAACAGTTGAATTGGGAATTTCAGAACCCAATCTTAGATTCATCACCTTCACTAGAGGTAGGAGAGGTTGTATTGGTACCTCACTTGGCACTAACATCACTATGATGCTGTTTGCTAGACTTCTACAAGGATTTTCATGGAGCCTATTGCCGGGAATCACAAAGATAGATTTCTCTGAAACTCACGGACTCTCTCTATCAAAGCCATTGCATTTGCATGCAAAACCACGTCTATCTCATAATATGTACCAAATACTTATTGATCATCAACCATAG | 1647 | 39.53 | MKALLLIIQSSYHNSVKATIAITFIAIILFISSIIYVFKFSQHNPKRKPLVRRLPPGPKPWPLLGCLPAMLWNKNSPTHLWIHEIMKQFNTEIACIRLGSNTHIIPVTSPELALEFLKTHDVVFGSRPISMTAEILSRGYLSTVLSPMGDQWRKMRRILVSQVLNPSTLHGMLGQRTKEADTLLRYIFILTRNGEAIDIRSITRHYCGNISRRMMFNRRYYGKGREDGGPTFEEEDHTQALFTILRHVHAFSISDFIPFLKPLDLDGHGKILKDALNSIQRYDDPIIEERVQQWKDGKKKKKVEVDDILDILLSLKDENGKSLLSIHEIKAQIIELQIATIDNPSNAVEWTMAELLNQQKFLQKAIEELDEVVGRERLVQESDIPKLKYLTACVRESFRLHPYSSFNVPHVSNSDIVVAGYFIPKGSQVLLSRLGLGRNPRIWEDPLRFDPERHLKDGTVELGISEPNLRFITFTRGRRGCIGTSLGTNITMMLFARLLQGFSWSLLPGITKIDFSETHGLSLSKPLHLHAKPRLSHNMYQILIDHQP | 548 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 25794890 | 25796765 | - | ClG42_03g0132800.10 | Clacu03g1328 | 245893 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu03g1328 | 548 | Coils | Coil | 352 | 372 | - | - | |
| Clacu03g1328 | 548 | Gene3D | Cytochrome P450 | 40 | 540 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1328 | 548 | PANTHER | CYTOCHROME P450 703A2-RELATED-RELATED | 24 | 540 | IPR051382 | - | |
| Clacu03g1328 | 548 | SUPERFAMILY | Cytochrome P450 | 55 | 534 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1328 | 548 | PRINTS | E-class P450 group I signature | 481 | 504 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1328 | 548 | PRINTS | E-class P450 group I signature | 391 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1328 | 548 | PRINTS | E-class P450 group I signature | 432 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1328 | 548 | PRINTS | E-class P450 group I signature | 206 | 224 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1328 | 548 | PRINTS | E-class P450 group I signature | 348 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1328 | 548 | PRINTS | E-class P450 group I signature | 471 | 481 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1328 | 548 | PRINTS | E-class P450 group I signature | 112 | 133 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu03g1328 | 548 | Pfam | Cytochrome P450 | 55 | 526 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu03g1323 | Clacu-Chr3:25691781 | Clacu03g1328 | Clacu-Chr3:25794890 | 5.60E-204 | dispersed | |
| Clacu03g1325 | Clacu-Chr3:25756070 | Clacu03g1328 | Clacu-Chr3:25794890 | 6.00E-207 | dispersed | |
| Clacu03g1328 | Clacu-Chr3:25794890 | Clacu05g0085 | Clacu-Chr5:1006069 | 6.50E-66 | dispersed | |
| Clacu03g1327 | Clacu-Chr3:25768719 | Clacu03g1328 | Clacu-Chr3:25794890 | 3.10E-254 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu03g1328 | - | - | - | 0.0 |