Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g1417 ATGAGGCCTGTCAAACGAGAACCCACCTCCAGCAGCCGCAGTAATCGGAGTAGAGGCGGAGGCGATGACGGCGCTGTCGATGCTGCGAGTTTAAGGGATATTAAGCGGGAGAGGGTTGCTCGGGTGCGAGAGAACTCCGGCGAAGACAATACGACTGAAGAAGAAGTGGGTCAGCAAGACTTGACAAAACGGCGGGTCCTTCGCTCTCGGTATCTCGCTGTCATTCATGAGATTAGTGAAAGAAGAGAGGATTTGTCGAAGGATCTGGATAAGTTTAATGTTATCATCAATGAGGTGGAAAAGTTGCACGAGCAAGTTCAAAAGCCAAGGGAACAAGTTGCAGATGCAGAAGCGTTGCAAGATATTGCAAACTCCCTCGTGACCTCTATTAGGTCTCAGTCAAATGAAGGTGTTACTCCATCAGATTTTGTCAGTTGTCTGCTCAGAGAGTTTGCTGACATTAACGTTAGTATGCAATCTGAAGAACAAGACCTGGTTTCTGTCAGTTGGAAAGATATTGGACTCAGTGTTTCGTCTATTTTCATGAATGGCCATGGATGCCGCACAATGCTTGGACCTATGAGCAATCAGTTGAAGCAGCGAAAGACTAATAATATTTCCAGGAAACGTTCCAGGCCTACTGAAAGTTCTAGACCTGCAGAGGTTGAAGATAATGGGTCCGAAGTAAAAACAGATACAGATAAGAACATGGGCATCATGTTTGGAATTTTGAGGAGGAATAAAACCGTTAAACTTGAACACTTGATATTGAATAGAAAGTCTTTTGCACAGACAGTAGAGAATTTATTTGCTCTGTCCTTTCTGGTTAAGGATGGTCGGGCTGAGATAACTATTGATAAAAATGGTTCTCACTTTGTGTCACCGAAGAATGCCCCTGCCCATAGTACCATTATGTCACATGAAGTTAATTACAGTCATTTTGTATTCAGATTCGATTACAAGGATTGGAAGCCAATGGTGGATATGGTACCAGTTGGAGAGGAGCTGATGCCCCACAGGAACATTCTGAACTCAGAGCAGGTGTCCCAAGCAGAAGCAACGGCGGATGATTCTGAAGCGGCAGCCTTACCGACTACACCAATCCGAAAGCTGTCAAGAAATCGAGGTTTAGTTATCCAAACCGTTGTTGAAGATTCTCCTGATAATGGTTCTCATTCAGGTGCGACTGCAATTTTGAGGTGCAAGAGAAAGCTTAGTCAAGATACATCTTAG 1233 44.36 MRPVKREPTSSSRSNRSRGGGDDGAVDAASLRDIKRERVARVRENSGEDNTTEEEVGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGLSVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATADDSEAAALPTTPIRKLSRNRGLVIQTVVEDSPDNGSHSGATAILRCKRKLSQDTS 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27375921 27379102 + ClG42_03g0141700.10 Clacu03g1417 245982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g1417 410 MobiDBLite consensus disorder prediction 208 231 - -
Clacu03g1417 410 Pfam Nse4 C-terminal 250 337 IPR014854 -
Clacu03g1417 410 MobiDBLite consensus disorder prediction 28 60 - -
Clacu03g1417 410 MobiDBLite consensus disorder prediction 1 60 - -
Clacu03g1417 410 MobiDBLite consensus disorder prediction 191 233 - -
Clacu03g1417 410 PANTHER UNCHARACTERIZED 38 377 IPR027786 GO:0005634(PANTHER)|GO:0005634(InterPro)|GO:0006281(InterPro)|GO:0006281(PANTHER)|GO:0030915(InterPro)|GO:0030915(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g1417 K22825 - csv:101220149 696.427