Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g1434 ATGCCTTCTGATATGCTTGGTAGAAGTCGCCATCAAGGGAAAACGTCATTTGTTGAGCATCGGACTTTTCTTCATCTTTATCATAGTTTCCATCGCTTATGGATATTTTTGGTCATGACGTTTCAGGCTCTGACCATTGTTGCATTTAACAATGGAAGCTTTAATATGAAGACCCTGCTGGAAGTTCTGAGTCTTGGTCCGACATTTGTTGTAATGAAGTTGATTGAGAGTGTTCTAGACATCCTAATGATGTATGGTGCATACTCTACTTCATGGCGTCTTTTTGTTTCTCGAATTCTTCGTTTTCTTTGGTTTAGTACTGCATCAGCTTCGACAACATTTCTTTATGTGAAAGCTCTTCAGGAGGGGAGTAAACCAAATGCAGAAAGAGTGATGTTCAGACTATATGTAATTGTGATTGGAATATATGGTGGTGTACAGCTTTGTCTCAATATCCTCATGCATATACCTGCTTGCCGTCTTTTAACAAATCAATGTGATTGGTGGCCTCTTGTTCGCTTTTTCAAGTGGATGCGTCAGGCTCTGGATATTGATGAGAATATTAGCACATCTGACAACCAAAAGGCTTGGTTAGATCTCAATTATGGCCCATCCTTTTTCAATTCATATGAATATTCAAGAATAAAATCAGGATTTTTGGATCTTAGTTCTTCAATGGAGTTTGTTTTTCGTCTACGGATTAGTTAG 708 38.28 MPSDMLGRSRHQGKTSFVEHRTFLHLYHSFHRLWIFLVMTFQALTIVAFNNGSFNMKTLLEVLSLGPTFVVMKLIESVLDILMMYGAYSTSWRLFVSRILRFLWFSTASASTTFLYVKALQEGSKPNAERVMFRLYVIVIGIYGGVQLCLNILMHIPACRLLTNQCDWWPLVRFFKWMRQALDIDENISTSDNQKAWLDLNYGPSFFNSYEYSRIKSGFLDLSSSMEFVFRLRIS 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27626077 27628886 + ClG42_03g0143400.10 Clacu03g1434 245999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g1434 235 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 9 180 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g1434 Clacu-Chr3:27626077 Clacu06g1871 Clacu-Chr6:29135470 2.40E-41 dispersed
Clacu03g1434 Clacu-Chr3:27626077 Clacu03g1439 Clacu-Chr3:27721948 3.00E-84 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g1434 K11000 - csv:101216435 324.709