Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g1453 ATGCTCGGGATGGCGGCGGAGGCAGTGACAACCATGGCGGTCGTGGCGGTGGCCGGGTGGTTGCTATTTGGAGTTGAGGGTAGACAGCCAGTGTTGCATAGGGTTGGAGGAGGAAAATATACTTGGACACCTAATATTAACTTCACTGATTGGTCAATTCATGAACACTTTTATGTTGGTGATTGGCTTTATTTTGGGTTTGATAAACATATCTACAACGTGTTGGAAGTGAACAAAACGAGCTACGAGGGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACATATTACTTTCTAAGTGGAAGAGGATTTTGCTTTCAAGGAATGAAAGTTGCTGTTTTTGTTGAAGAGTACTCTCCTCCCATTTCACCACCAAATTTACCCAATACTTCTCCATCTTTACATTCATTAATATGGCCTTTCTCCCTCTTGCTATCCATCAACATTTCCATGGCCAATTCCTTCTTCTAA 513 42.11 MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSINISMANSFF 170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28071494 28072604 - ClG42_03g0145300.10 Clacu03g1453 246018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g1453 170 Gene3D - 31 133 IPR008972 -
Clacu03g1453 170 SUPERFAMILY Cupredoxins 32 129 IPR008972 -
Clacu03g1453 170 PANTHER BLUE COPPER PROTEIN 17 130 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Clacu03g1453 170 FunFam Lamin-like protein 29 132 - -
Clacu03g1453 170 Pfam Plastocyanin-like domain 42 123 IPR003245 GO:0009055(InterPro)
Clacu03g1453 170 ProSiteProfiles Phytocyanin domain profile. 31 131 IPR003245 GO:0009055(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g1453 Clacu-Chr3:28071494 Clacu10g1537 Clacu-Chr10:28652049 2.60E-37 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g1453 - - - 0.0