Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g1462 ATGGCCGAGGTTATGAACATGGCCGCCGCCGCCGCTGCCGCCGACGAGTCGTTGGACCGCCGTCGTGATCGTCAAGAGAAATCGTCTGAGGAGCGACCTCATTCCTCGCCGCCGCCGCCGCCAGCTGCCGCTCCTCCTCCTCCCTCCAGAAGAAGGGATAGAGATGAGAGGGATAGGAGAGACGACCGGGATATTGATCGTCCTCCGAATCGACGCGGCGATAATTACGATCGTAATCGCTCTCCGCCTTCGCTGCCTCCGAGGGACAGAGATAGAGATAGAGATAGGGATTATAAACGTCGGAGCAGTCTTAGTCCTCCACCGCCTTACAGGGATCGGAGACACTCGCCTCCCAGACGGTCTCCTCCCCCACCTTACAAGCGTTCCAGGAGAGATGATGGTGGGTATGATGGAAGAAAGGGAAGCCCTAGAGGAGGTTTCGGGCCTGGCGATAGGAGGTTTGGTTATGATTATGGTGGGGGATATGAACGGGAAATGCGAGGCCGACCTGGATATGTTGATGAAAGACCTCTAGGTCGGTACATTGGTCGTTCATCTGGTGGCTATCAAGATTGGGATTCTAGTCGTGGTGGGCATGGTGATGCACTCAATGCAGGAGGTGGCCAAAGAGAAGGCTTGATGACATATAAGCAATTTATTCAAGAACTTGAAGATGATATACTACCTGCTGAAGCTGAGCGCAGATATCAAGAATACAAGTCAGAGTATATTACAACGCAGAAACAAGCTTTTTTTGATTCTCATAAGGATGAAGAATGGTTGAGAGACAAATATCATCCGACCAACCTCGTTACTGTCATTGAAAGGAGGAACGAACTTGCACAAAGAACTGCTAAGGATTTTTTGCTTGACCTGCAAAGTGGAACACTGGAATTAGGTCCAGGGATCAATGCAGCAGCTACAAATAAATCAGGGCAGGTTAGTGAACCAAATTCAGATGATGAAGCAGACAATGATGGCAAACGTAGGCGTCATGGTAGAGGACCGGCAAAAGAAATGGATCTTCTTTCTGCTGCTCCTAAGGCCCACCCTGTTAGTTCTGAACCAAGACGAATCCAGATTGACATTGAACAAGCTCAAGCTCTTGTCCGTAAACTTGATTCTGAGAAAGGAATAGAAGAAAATATTTTAAGTGGTTCTGACAGTGACAAACTAGGTCGGGAAAAAGCACATGGTGGCTCTTCTGGCCCAGTCATAATCATACGGGGGCTGACAACTGTCAAAGGCTTGGAGGGTGTTGAGCTATTGGACACACTTCTCACATATCTGTGGCGTATCCATGGTCTAGATTACTATGGAATGGTCGAGACAAGAGAAGCTAAGGGTCTTCGTCATGTAAGAGAAGAGGGGAAGAATTCTAACATAGCTGGTGGTGCGGATGAGTGGGAGAAGAAACTTGACTTACGTTGGCAAGAGAGATTGAGAGGTCAGGATCTGTTGGAAGTGATGACTGCCAAAGATAAAATAGAGGCTGCTGCTCTTGAAGCTTTTGATCCATATGTTCGCAAGATAAGAGATGAAAAATATGGATGGAAATATGGCTGTGGAGCCAAGGGTTGCACTAAGCTGTTTCATGCTCCCGAGTTTGTACATAAGCATCTTAACTTGAAACATCCAGAGCTTGTGATGGAGCTGACTTCAAAAGTGCGTGAAGAGCTGTATTTCCAAAATTACATGAAGGACACAGATGCTCCTGGAGGGACGCCTGTTATGCAGCAATCACTTCCGAAGGATAAGCCACAGAGACGTAGGATGAATTTAGATGGTCGGCTGAAGGATGATAGAGGCAATCGCAGGGACCGCGATAATTGGGCAAATGGGGGCGACAGATTTGATAGATCTGAGAACCCACAATCAACTGATTTCCAATCAGCAAATGATGGTACGGATGGTGGGAACATTGATGATCCTATGTTTGATACTTTTGGTGGACAAGGAAGACATGTTGCTCCTTTTGCCTCTGAAATACCACCGCCAGTGCTTATGCCGGTTCCTGGTGCTGGTCCATTAGGACCTTTTGTCCCTGCTCCGCCTGAAGTTGCAATGAGAATGTTGCGGGAACAAGGAGGTCCACCTCCTTTTGAGGGTGGTGGAAGAAATGGAAGGCCAGGACCTCAATTAGGTGGATCTGCTCCAATCCTTGCCCTATCTTCAGGTTTTCGACAGGATCCTCGTCGAATACGGAGTTATCAAGACCTAGATGCACCCGAGGACGAAGTCACTGTAATAGATTATAGAAGCTTGTAG 2268 47.93 MAEVMNMAAAAAAADESLDRRRDRQEKSSEERPHSSPPPPPAAAPPPPSRRRDRDERDRRDDRDIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPPPPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPLGRYIGRSSGGYQDWDSSRGGHGDALNAGGGQREGLMTYKQFIQELEDDILPAEAERRYQEYKSEYITTQKQAFFDSHKDEEWLRDKYHPTNLVTVIERRNELAQRTAKDFLLDLQSGTLELGPGINAAATNKSGQVSEPNSDDEADNDGKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQIDIEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNIAGGADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMKDTDAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSTDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPILALSSGFRQDPRRIRSYQDLDAPEDEVTVIDYRSL 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28165136 28171941 + ClG42_03g0146200.10 Clacu03g1462 246027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g1462 755 MobiDBLite consensus disorder prediction 584 616 - -
Clacu03g1462 755 MobiDBLite consensus disorder prediction 48 139 - -
Clacu03g1462 755 MobiDBLite consensus disorder prediction 321 338 - -
Clacu03g1462 755 MobiDBLite consensus disorder prediction 303 358 - -
Clacu03g1462 755 MobiDBLite consensus disorder prediction 567 650 - -
Clacu03g1462 755 MobiDBLite consensus disorder prediction 157 173 - -
Clacu03g1462 755 PANTHER ARSENITE-RESISTANCE PROTEIN 2 348 751 IPR039727 GO:0006397(InterPro)|GO:0016604(PANTHER)|GO:0031053(PANTHER)
Clacu03g1462 755 MobiDBLite consensus disorder prediction 699 719 - -
Clacu03g1462 755 Pfam SERRATE/Ars2, N-terminal domain 217 298 IPR021933 -
Clacu03g1462 755 MobiDBLite consensus disorder prediction 1 173 - -
Clacu03g1462 755 MobiDBLite consensus disorder prediction 15 33 - -
Clacu03g1462 755 Pfam Arsenite-resistance protein 2 454 658 IPR007042 -
Clacu03g1462 755 ProSitePatterns Zinc finger C2H2 type domain signature. 522 545 IPR013087 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g1462 K27103 - csv:101219335 1186.4