Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g1549 ATGGAGTCCATGGCTTCTCATTTTCTTCTTCTTCTTCTTCTTCTTCTTATTCCTTCTGTCTTTGTCGATGCCAAGAAAACTTACATTGTTCGTATGAAACATAATGCTCTGCCATCGGAGTATCTCACCCACCATGACTGGTACTCCGCTCATCTTCAATCTCTATCTTCATCTTCAACCTCCGATTCCCTTCTCTACACTTACACTTCCGCCTACCATGGCTTCGCTGCTTCTCTGGATTCAAATGAAGTAGAATTGCTCCGCCAATCCGATTCAGTTTTGGGTGTCTACGAAGACTCTGTTTACAATCTTCACACCACTCGCACTCCGGGATTCCTTGGTCTCAACTCCGATTTTGGGTTATGGGAAGGTCACAACACTCAGGATCTTAATCAAGCTTCTCACGATGTCATCATTGGGGTTCTCGATACTGGGATTTGGCCGGAATCGAAGAGCTTTGATGACACTGGAATGCCGGACATCCCATCACGGTGGCGTGGAGAATGTGAATCAGGACCCGATTTCAATCCTTCTCTCTGTAACAAGAAACTAATCGGAGCTCGTAGCTTCTCCAAGGGTTATCAAATGGCTTCCGGTGGTGGGTATTTCAGAAAACCTAGAGAAAACGAGTCGCCTCGAGATCAAGACGGACATGGAACGCACACAGCGAGCACAGCTGCTGGTTCACATGTGGCTAACGCGAGCTTACTTGGTTATGCAAGAGGCATTGCTAGAGGAATGGCTCCTCAAGCAAGAGTTGCTGCTTACAAGACTTGTTGGCCTACTGGTTGCTTCGGATCTGACATTCTCGCCGGTATGGATCGAGCGATATCCGACGGCGTCGATGTACTTTCACTCTCTTTAGGTGGTGGCTCTGCTCCCTATTACAGAGATACCATAGCAATTGGAGCATTTGCAGCCATGGAGAAGGGGGTTTTTGTTTCTTGCTCAGCTGGGAATAGTGGACCAAATAAGGCTTCTCTAGCCAATGTAGCACCGTGGATCATGACGGTCGGAGCCGGAACGCTCGACCGGGACTTCCCAGCTTATGTCCAGCTTGGAAATGGTAAACGCTTCACTGGAGTGTCGCTTTACAGTGGTCAAGGAATGGGGAATAAGGCAGTGGAATTGGTATACAACAAAGGAAGCAACACCTCCAGCAATATGTGCTTGCCGGGATCTCTCGACCCGGCGGTGGTTCGAGGGAAAGTGGTGGTTTGCGACCGAGGAATCAACGCCAGAGTAGAAAAGGGAGGAGTGGTGCGAGATGCAGGTGGGATTGGGATGATTCTTGCAAACACAGCAGCTAGTGGGGAGGAATTGGTGGCTGATAGTCACTTGCTGCCAGCCGTGGCGGTCGGGCGGAAAACCGGCGACTTGATCCGACAGTATGTTCGGTCAGCTTCGAATCCAACGGCTGTGCTGAGCTTTGGTGGGACAATTCTGAATGTCCGCCCATCTCCGGTGGTGGCGGCGTTTAGTTCTAGAGGACCCAACTTGGTAACTCCCCAAATCCTAAAGCCGGATGTTATTGGTCCTGGCGTTAATATCCTGGCTGCTTGGTCCGAGTCCATTGGACCTACCGGATTGGACAATGACAAAAGGAAAACTCAGTTCAATATCATGTCAGGAACTTCCATGTCTTGCCCACATATAAGTGGGTTGGCTGCATTGCTAAAGGCAGCTCATCCACAATGGAGTCCAAGTGCAATCAAATCCGCGTTAATGACAACCGCATACACACAGGACAACACCAACTCATCGCTCCGTGATGCAGCCGGAGGGGCGTTTTCCAATCCATGGGCTCATGGAGCTGGCCATGTTGATCCTCACAAAGCTCTATCCCCTGGCCTTCTATACGATATCTCGACTGATGATTACATTGCCTTCTTGTGCTCATTGGACTATGGGATCGATCATGTTCAAGCTATCGTGAAACGTTCGAACATAACTTGCTCTAGAAAGTTTGCCGATCCAGGACAACTTAACTACCCTTCGTTTTCAGTTGTGTTTGGGAGCAAGAGGGTTGTTCGGTACACTCGTATCGTCACCAATGTTGGCGCTGCAGGGTCGGTTTACGAAGTGGCTACTACTGCACCGTCTGTTGTGAAGGTGACTGTGAAACCTTCAAAACTTGTGTTCACTAAAGTTGGGGAGAGGAAGAGGTACACAGTTACGTTTGTGGCGAGTAGGGACGCTGCTCAAACGACGAGATTTGGGTTCGGTTCGATTGCGTGGAGCAATGACCAACACCAAGTTAGAAGCCCAGTGGCATTCGCTTGGACAAGGTTGTGA 2295 49.46 MESMASHFLLLLLLLLIPSVFVDAKKTYIVRMKHNALPSEYLTHHDWYSAHLQSLSSSSTSDSLLYTYTSAYHGFAASLDSNEVELLRQSDSVLGVYEDSVYNLHTTRTPGFLGLNSDFGLWEGHNTQDLNQASHDVIIGVLDTGIWPESKSFDDTGMPDIPSRWRGECESGPDFNPSLCNKKLIGARSFSKGYQMASGGGYFRKPRENESPRDQDGHGTHTASTAAGSHVANASLLGYARGIARGMAPQARVAAYKTCWPTGCFGSDILAGMDRAISDGVDVLSLSLGGGSAPYYRDTIAIGAFAAMEKGVFVSCSAGNSGPNKASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMGNKAVELVYNKGSNTSSNMCLPGSLDPAVVRGKVVVCDRGINARVEKGGVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGRKTGDLIRQYVRSASNPTAVLSFGGTILNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLDNDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPQWSPSAIKSALMTTAYTQDNTNSSLRDAAGGAFSNPWAHGAGHVDPHKALSPGLLYDISTDDYIAFLCSLDYGIDHVQAIVKRSNITCSRKFADPGQLNYPSFSVVFGSKRVVRYTRIVTNVGAAGSVYEVATTAPSVVKVTVKPSKLVFTKVGERKRYTVTFVASRDAAQTTRFGFGSIAWSNDQHQVRSPVAFAWTRL 764
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29058726 29061099 - ClG42_03g0154900.10 Clacu03g1549 246114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g1549 764 ProSiteProfiles Serine proteases, subtilase domain profile. 118 614 - -
Clacu03g1549 764 Pfam PA domain 376 460 IPR003137 -
Clacu03g1549 764 FunFam subtilisin-like protease SBT1.5 344 482 - -
Clacu03g1549 764 FunFam Subtilisin-like protease SBT1.9 18 105 - -
Clacu03g1549 764 SUPERFAMILY Subtilisin-like 104 618 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu03g1549 764 SUPERFAMILY Protease propeptides/inhibitors 26 103 - -
Clacu03g1549 764 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Clacu03g1549 764 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Clacu03g1549 764 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Clacu03g1549 764 MobiDBLite consensus disorder prediction 198 225 - -
Clacu03g1549 764 Pfam Fibronectin type-III domain 661 758 IPR041469 -
Clacu03g1549 764 Pfam Peptidase inhibitor I9 27 105 IPR010259 -
Clacu03g1549 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 105 IPR037045 -
Clacu03g1549 764 FunFam Subtilisin-like protease SBT1.5 136 355 - -
Clacu03g1549 764 Gene3D Peptidase S8/S53 domain 136 627 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu03g1549 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Clacu03g1549 764 Gene3D - 344 482 - -
Clacu03g1549 764 CDD PA_subtilisin_like 350 473 - -
Clacu03g1549 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 757 IPR045051 -
Clacu03g1549 764 FunFam Subtilisin-like protease SBT1.5 631 762 - -
Clacu03g1549 764 CDD Peptidases_S8_3 102 580 IPR034197 -
Clacu03g1549 764 Gene3D - 631 761 - -
Clacu03g1549 764 Pfam Subtilase family 135 584 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g1803 Clacu-Chr1:30194963 Clacu03g1549 Clacu-Chr3:29058726 6.00E-235 dispersed
Clacu03g1549 Clacu-Chr3:29058726 Clacu08g1797 Clacu-Chr8:27298284 2.80E-224 dispersed
Clacu07g0132 Clacu-Chr7:1731586 Clacu03g1549 Clacu-Chr3:29058726 7.20E-188 transposed
Clacu08g1807 Clacu-Chr8:27392404 Clacu03g1549 Clacu-Chr3:29058726 1.70E-144 transposed
Clacu03g1549 Clacu-Chr3:29058726 Clacu09g0110 Clacu-Chr9:1017185 3.30E-217 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g1549 - - - 0.0