Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu03g1829 ATGGTGATGGCAAACGAAATTAAATACCTGGTAAAGGCAGGTAAATGTAAGCCACCGACGTCACAGATGACGGACGAGCGCGGGTTTGTGTGGTGGTGGCTGGTATTGGCGTTTGGGATCCGACGGTCAGAAACCGCTTGTGACATCTGGTGCTTTACCCGCTGGAGCAGAGCCATGCCAAAGCCTTTGCTCCTTCTCTTTCTCTTATCACTGCCTTTTACCAAATGGGTTCATGCCTTTCTCCCCTATAACCTCTCTGATTCCTCTCTCTTCGACTCTTATGAAACCTCCTTTGCTGCTACCCTTAAACCTCTCATGGTGCCTCTCACTCTCATTCATGGAGCAGATGCAAAACAAGCAGTCTGTTTGGATGGCACTTTGCCTGGATATCACTTGCATCGTGGATATGGGTCAGGAGCAAATAGCTGGCTTGTTCAATTGGAGGGAGGTGGATGGTGTAACAATATTAGGAACTGTGTCTATCGTAAAACAACCAGGCGTGGATCATCAAGATTTATGGAGAAGCAGATACCATTTACTGGAATCCTGAGCAACAGAGCTGAAGAAAATCCTGATTTTTTTAATTGGAACAGAGTAAAGGTTCGTTACTGTGATGGTGCCTCTTTTACTGGGGATTCAGAAAACAAGGCTGCACAGTTGCAATTTAGAGGACAGCGGATTTGGTTGGCTGCCATGGAAGCATTGAGGGCAGAGGGAATGCGATTTGCTAAACAGGCCTTGCTTTCTGGATGCTCTGCTGGAGGTTTGGCATCTATTTTACACTGTGATGAGTTTAGAGACTTATTTCCAAGAACTACTAAAGTAAAATGTCTGAGTGATGCTGGATTATTCCTTGATGTGGCTGATATATCTGGAGGGCACTACATTAGAAACTTATTTGGAGGTGTGGTGGGCTTGCAGATTTTGGAAGCATATGATGGCATGGTCATGGAATCATGTCATATTGTGAAGATAGAAGTAGTAATGGGCACCATTCCTTATGTTTCCCTTCATATTGTGGAAATCATAAACGGTTTCCTCTTCCATCTGTTATATGCTGGTAATCAGGACTTTGGCGTTGCCAATATGTTAGCTGCATTGGTTATAAGTTCAGGAGCAGGAAGGAATCTGCCATCCGTTTGTACGAGCCATCTCGATCCAACTTCGTGTTTCTTCCCACAAAATTTAATTGCTGGAATCAGAACCCCACTGTTTCTTGTCAACGCCGCATACGATTCCTGGCAGATACAATCCAGTATAGCCCCACCTTCTCTGGATCCAGCTGGGTATTGGCATGATTGTAGGCTGAATCATGCAAAATGTAACCAACCTCAGATTCAATTTCTTCAAGGATTCAGGAACCAAATGTTGAATGCTGTTAGCGATTTCTCAAAATCCTCTAAAAATGGGTTATTTATTAATTCATGTTTTGCTCACTGCCAAACTGAGAGACAGGACACATGGTTCGGCGACAATTCTCCTGTCATCGGAAACAAGCCAATTGCTCTGGCTGTTGGAGATTGGTACTTCGATAGAGCAGCGGTGAAAGCAATCGATTGTCCCTATCCTTGTGACAGGACTTGCCACCATCTGGCGAAGTCATATTGCAATTTGATTAAGAAGTCAATAAACAAGGAAGAAGAAGCTGCTGAGATGACAAATGTGATCTGCAGTCCTGCAAACTTGTTTCAACATAGAAGAAAGGTTCGTATCATCATCCTCTAG 1725 44.0 MVMANEIKYLVKAGKCKPPTSQMTDERGFVWWWLVLAFGIRRSETACDIWCFTRWSRAMPKPLLLLFLLSLPFTKWVHAFLPYNLSDSSLFDSYETSFAATLKPLMVPLTLIHGADAKQAVCLDGTLPGYHLHRGYGSGANSWLVQLEGGGWCNNIRNCVYRKTTRRGSSRFMEKQIPFTGILSNRAEENPDFFNWNRVKVRYCDGASFTGDSENKAAQLQFRGQRIWLAAMEALRAEGMRFAKQALLSGCSAGGLASILHCDEFRDLFPRTTKVKCLSDAGLFLDVADISGGHYIRNLFGGVVGLQILEAYDGMVMESCHIVKIEVVMGTIPYVSLHIVEIINGFLFHLLYAGNQDFGVANMLAALVISSGAGRNLPSVCTSHLDPTSCFFPQNLIAGIRTPLFLVNAAYDSWQIQSSIAPPSLDPAGYWHDCRLNHAKCNQPQIQFLQGFRNQMLNAVSDFSKSSKNGLFINSCFAHCQTERQDTWFGDNSPVIGNKPIALAVGDWYFDRAAVKAIDCPYPCDRTCHHLAKSYCNLIKKSINKEEEAAEMTNVICSPANLFQHRRKVRIIIL 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32077883 32083922 - ClG42_03g0182900.10 Clacu03g1829 246394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu03g1829 574 Pfam Pectinacetylesterase 103 308 IPR004963 GO:0016787(InterPro)
Clacu03g1829 574 Pfam Pectinacetylesterase 360 513 IPR004963 GO:0016787(InterPro)
Clacu03g1829 574 PANTHER NOTUM-RELATED 103 309 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g1829 Clacu-Chr3:32077883 Clacu04g0865 Clacu-Chr4:23001627 3.20E-116 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu03g1829 K19882 - csv:101218273 480.715