Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu04g0263 ATGGCAGAGGCGGCGGCAGCCGGTTTCTGGCGGAAGCTATTAACCGGACGGTGGTTGATGCTATTTGCATCACTAACAATCATGGCAATGAACGGATCAGGCTACATGTTCGGGCTCTACTCCCCCCGCATCAAATCCATTTTTGGTTACGATCAGTCGGCTCTCAATTTGATCAGCTTCTTCAAGGACTTGGGTGGCAATCTTGGGGTGGTTTCCGGCCTCCTCTACGAGGTGGCGCCACCATGGGTGGTTCTCTCGGTCGGCGCCGTCCTCAACTTCTTCGCCTATTTCATGCTCTGGTTGGCAGTTTCCGGCCGGACCGCCGCACCGGGGCTGTGGCTGATGTGCGTTTATATGGGCGTTGCTGCTAACTCATTGTCTTTTGCTAATACGGCGGCTTTGGTTACTTGTGTTCGTAACTTTCCTCTTCATCGTGGCTGCCTTCTTGGCCTTCTTAAAGGGTACATAGGTTTAAGTGGTGCAATAATGACACAACTTTATCAGGCCATGTATGGAGATGACCCAGAAGGCCTTATTTTGATGATTGCTTGGCTCCCATCCGCTGTCTCATTAGCTTCCCTTCCACTAATTCGAGTGATGAACACCAATAACCACCAAGCCAATGAACTCAAACCATTCTACACCCTTCTTTACATATCCCTTGCCCTTTCCACCTCTCTCATCGCCATTATCATCCCTCAAACTAAATTTCACTTCTCTAAAACCCACTATATTGCCGCCGCTTCTCCCGTCCTTCTCTTTCTCCTCCTCCCACTCGTCGTTGTTGTTAACCAAGAACTCGCCCTCCACAATCACCCACCTCCAACGTCGATACAAGTACAACCGTCGTCACTGCACCCGGCGACGACGACGACCCATTGGTACAAAAACATCTTCACCAGACGGCCCTCGCTTGGAGACGATCACACCATCTTGCAAGCAATTTTAAGCATGGACATGGCAATTCTATTTGTCGCAACAACGTGTGGCGTCGGAGGAGCATTGACGGTGGTCGATAATGTCGCACAAATCGGCGCATCGTTAGACTATCCAGCTCATAGCATTTCGAGTTTCGTGTCACTAATGAGCATTTGGAACTTCCTAGGTCGTGTAGTGGCAGGGTATGTTTCTGAATTTCTTTTGATGAAGTATGGATTACCTCGACCATTGATGCTCACTTTTGTCATACTAATGTCTTGCATTGGCCATATCTTGATTGCGTTTGGTGTCCCAAACTCTCTCTATTTTGCCTCCATCATCACTGGGTTTTGCTTGGGGGCACAACTGCCATTAACGGCCACGATCGTCTCTGATCTTTTTGGGTTGAAACACTATTCAACGTTGTACAACGTAGGATCTGTGTCAAGCCCTTTCGGATCCTACATTTTCAATGTTAGAGTGGCAGGTGGGGTTTATGATAGAGAAGGGGAAAGGCAAAGTAATGGGATCACAAAAGTGTGTAAAGGGGTGGGGTGTTATAGGCTTAGTTTTTTAATAATCATGGGGGCTTGTGTTTTTGGGAGTTTGGTTTCAATGGTTTTGGTTCGTAGGACAAGGAAGTTCTACAAAGATGACATTTATGCAAGGTTTAGAAAAGGAGAAGAAATCACAACACCACGCACTACTACAACTACTACAACTACTCCTACTTCTTGTACTCTTTCCTTCACACAACAAGGATAA 1683 47.24 MAEAAAAGFWRKLLTGRWLMLFASLTIMAMNGSGYMFGLYSPRIKSIFGYDQSALNLISFFKDLGGNLGVVSGLLYEVAPPWVVLSVGAVLNFFAYFMLWLAVSGRTAAPGLWLMCVYMGVAANSLSFANTAALVTCVRNFPLHRGCLLGLLKGYIGLSGAIMTQLYQAMYGDDPEGLILMIAWLPSAVSLASLPLIRVMNTNNHQANELKPFYTLLYISLALSTSLIAIIIPQTKFHFSKTHYIAAASPVLLFLLLPLVVVVNQELALHNHPPPTSIQVQPSSLHPATTTTHWYKNIFTRRPSLGDDHTILQAILSMDMAILFVATTCGVGGALTVVDNVAQIGASLDYPAHSISSFVSLMSIWNFLGRVVAGYVSEFLLMKYGLPRPLMLTFVILMSCIGHILIAFGVPNSLYFASIITGFCLGAQLPLTATIVSDLFGLKHYSTLYNVGSVSSPFGSYIFNVRVAGGVYDREGERQSNGITKVCKGVGCYRLSFLIIMGACVFGSLVSMVLVRRTRKFYKDDIYARFRKGEEITTPRTTTTTTTTPTSCTLSFTQQG 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8129539 8133881 - ClG42_04g0026300.10 Clacu04g0263 246660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu04g0263 560 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 531 - GO:0016020(PANTHER)
Clacu04g0263 560 SUPERFAMILY MFS general substrate transporter 18 525 IPR036259 -
Clacu04g0263 560 Gene3D MFS general substrate transporter like domains 315 523 IPR036259 -
Clacu04g0263 560 CDD MFS_Mch1p_like 16 507 - -
Clacu04g0263 560 Pfam Nodulin-like 17 263 IPR010658 -
Clacu04g0263 560 Pfam Major Facilitator Superfamily 340 520 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu04g0263 Clacu-Chr4:8129539 Clacu08g0930 Clacu-Chr8:19443626 5.10E-159 dispersed
Clacu04g0263 Clacu-Chr4:8129539 Clacu10g1973 Clacu-Chr10:33252910 2.10E-160 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu04g0263 - - - 0.0