Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu04g0564 CTGGATCCGACTCCCGAAGCACCGCAGTCCTTGAAGGCTCCCGCTGCCTCCAATTCCACCGGAAACGGTCAGATCCGTTACCGATCTCCGTCTTCCGCCGAGCTTCTTGAAGGCCAATCCGCCTCTCTTCCACTTCAAGATCAACAGAAGCTACTTCAGTTGGAATTTGACAAGATGCATAAACGTTCCGGGAAGCAACAGTCGGAATCGTTGTCTAACAAGATCTATAGATTCAGAGGGGTGTTGTTGCTTACCTCTCTTTCTCTTTTCTTAATCGCCTTTGTTCTTTATCTCATGCCGGCCCGTGAGGATTACTCCTTCAACCACCGCAAAGTTTCCCCTGATCACAGGTCTTCTTCTTCCAAGACTTCTTTTGCTGTTATTTTTGATGCTGGTAGCTCTGGGAGTCGTGTCCATGTCTTTTGCTTTGATCATAATCTCGATCTCCTCCCCGTTGGCAAGGATATCGAACTTTTCGAACAACTTAAACCAGGACTGAGTGCATATGCTGACAGCCCCAAGGATGCTGCAGCATCTCTAATTTCCCTCTTGGACAAAGCTCAAAACGTGGTTCCAAAAGGGCTGCGGCCAATGACCCCCGTTAGAGTTGGGGCAACTGCTGGCTTGAGGGCTCTGAAAGGTGATGCATCTGATAGAATTCTGCAGGCGGTGAGGGATCTCCTGAGAGACAAAAGTGACCTCAGGTTGGAGGGAGATGCCGTCTCTGTGATTGATGGAACTCAAGAAGGTTCTTACCTTTGGGTGACGTTAAACTATCTGCTTGGGAACTTGGGTAAGAAATATTCGGATACAGTTGGAGTTGTAGATCTTGGTGGAGGATCTGTTCAAATGGCATATGCTATCTCGGAAAAGGATGCTGCTCGATTATCAGATGCCGAGAGTGCATACGTCAAAAAGATGTATCTGAAGGGAGCAACTTACTATCTCTATGTTCACAGTTATTTGCATTATGGGTTACTAGCTGCTCGAGCAGAGGTTTTGAGTGTCTCTGAAGATTCTAGCAATGATTGCATCCTATCTGGCTACGAAGGTGAATACCATTACGGAGGAAAGGACTACAAAGCATCTGCCTCTTCATCAGGGTCTAGCTTGAATGGATGCAGGAGTTCAGTTTTGAAGGCCCTCAAGGTTAATGAATCCACATGTACTCACATGAAGTGCACTTTTGGTGGTGTTTGGAATGGCGGAGGAGGAGACGGCCAGAAGAATCTCTTCGTTGCTTCATTTTTCTTTGACAGGGCGGCTGAGGCTGGTTTTGCTGACCCCAATAAGCCGGTTGCTAAAGTTCGCCCAGCAGACTTCAATGATGCAGCGAAGCAGGCATGCCAAATCAAAGTCGAGGACGCCAGTACATATCCCAATGTCGAGAAGGATAACCTGCCGTATTTGTGTATGGATCTTGTGTATCAGTACACACTCCTTGTAGATGGATTCGGGCTGGATCCCTGGCAAGAGATCACATTGGTGAAGAAGGTTAAATATCAGAACTCCTTGGTGGAAGCAGCATGGCCTCTAGGCAGTGCCATCGAAGCTGTCTCGTCGTTAGCCTAA 1572 47.65 LDPTPEAPQSLKAPAASNSTGNGQIRYRSPSSAELLEGQSASLPLQDQQKLLQLEFDKMHKRSGKQQSESLSNKIYRFRGVLLLTSLSLFLIAFVLYLMPAREDYSFNHRKVSPDHRSSSSKTSFAVIFDAGSSGSRVHVFCFDHNLDLLPVGKDIELFEQLKPGLSAYADSPKDAAASLISLLDKAQNVVPKGLRPMTPVRVGATAGLRALKGDASDRILQAVRDLLRDKSDLRLEGDAVSVIDGTQEGSYLWVTLNYLLGNLGKKYSDTVGVVDLGGGSVQMAYAISEKDAARLSDAESAYVKKMYLKGATYYLYVHSYLHYGLLAARAEVLSVSEDSSNDCILSGYEGEYHYGGKDYKASASSSGSSLNGCRSSVLKALKVNESTCTHMKCTFGGVWNGGGGDGQKNLFVASFFFDRAAEAGFADPNKPVAKVRPADFNDAAKQACQIKVEDASTYPNVEKDNLPYLCMDLVYQYTLLVDGFGLDPWQEITLVKKVKYQNSLVEAAWPLGSAIEAVSSLA 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18970768 18975785 - ClG42_04g0056400.10 Clacu04g0564 246961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu04g0564 523 MobiDBLite consensus disorder prediction 11 27 - -
Clacu04g0564 523 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 244 259 IPR000407 GO:0016787(InterPro)
Clacu04g0564 523 CDD NBD_sugar-kinase_HSP70_actin 127 307 - -
Clacu04g0564 523 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 77 519 IPR000407 GO:0016787(InterPro)
Clacu04g0564 523 MobiDBLite consensus disorder prediction 1 27 - -
Clacu04g0564 523 FunFam Apyrase 1 245 500 - -
Clacu04g0564 523 Gene3D - 125 516 - -
Clacu04g0564 523 Pfam GDA1/CD39 (nucleoside phosphatase) family 119 521 IPR000407 GO:0016787(InterPro)
Clacu04g0564 523 Gene3D Exopolyphosphatase. Domain 2 245 500 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g1079 Clacu-Chr3:19506998 Clacu04g0564 Clacu-Chr4:18970768 5.60E-143 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu04g0564 K14641 - csv:101220305 865.144